ID A0A2P2E7Y9_9PROT Unreviewed; 440 AA.
AC A0A2P2E7Y9;
DT 23-MAY-2018, integrated into UniProtKB/TrEMBL.
DT 23-MAY-2018, sequence version 1.
DT 27-MAR-2024, entry version 17.
DE RecName: Full=Endolytic peptidoglycan transglycosylase RlpA {ECO:0000256|HAMAP-Rule:MF_02071};
DE EC=4.2.2.- {ECO:0000256|HAMAP-Rule:MF_02071};
GN Name=rlpA {ECO:0000256|HAMAP-Rule:MF_02071,
GN ECO:0000313|EMBL:GBF57179.1};
GN ORFNames=PbB2_00839 {ECO:0000313|EMBL:GBF57179.1};
OS Candidatus Phycosocius bacilliformis.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Caulobacterales;
OC Caulobacterales incertae sedis; Phycosocius.
OX NCBI_TaxID=1445552 {ECO:0000313|EMBL:GBF57179.1, ECO:0000313|Proteomes:UP000245086};
RN [1] {ECO:0000313|EMBL:GBF57179.1, ECO:0000313|Proteomes:UP000245086}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BOTRYCO-2 {ECO:0000313|EMBL:GBF57179.1,
RC ECO:0000313|Proteomes:UP000245086};
RA Tanabe Y., Yamaguchi H., Watanabe M.M.;
RT "Draft Genome Sequence of "Candidatus Phycosocius bacilliformis," an
RT Alphaproteobacterial Ectosymbiont of the Hydrocarbon-Producing Green Alga
RT Botryococcus braunii.";
RL Genome Announc. 6:e00396-18(2018).
CC -!- FUNCTION: Lytic transglycosylase with a strong preference for naked
CC glycan strands that lack stem peptides. {ECO:0000256|HAMAP-
CC Rule:MF_02071}.
CC -!- SIMILARITY: Belongs to the RlpA family. {ECO:0000256|HAMAP-
CC Rule:MF_02071, ECO:0000256|RuleBase:RU003495}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GBF57179.1}.
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DR EMBL; BFBR01000002; GBF57179.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2P2E7Y9; -.
DR Proteomes; UP000245086; Unassembled WGS sequence.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.
DR GO; GO:0008932; F:lytic endotransglycosylase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0042834; F:peptidoglycan binding; IEA:InterPro.
DR GO; GO:0071555; P:cell wall organization; IEA:UniProtKB-KW.
DR GO; GO:0000270; P:peptidoglycan metabolic process; IEA:UniProtKB-UniRule.
DR CDD; cd22268; DPBB_RlpA-like; 1.
DR Gene3D; 2.40.40.10; RlpA-like domain; 1.
DR Gene3D; 3.30.70.1070; Sporulation related repeat; 1.
DR HAMAP; MF_02071; RlpA; 1.
DR InterPro; IPR034718; RlpA.
DR InterPro; IPR009009; RlpA-like_DPBB.
DR InterPro; IPR036908; RlpA-like_sf.
DR InterPro; IPR012997; RplA.
DR InterPro; IPR007730; SPOR-like_dom.
DR InterPro; IPR036680; SPOR-like_sf.
DR NCBIfam; TIGR00413; rlpA; 1.
DR PANTHER; PTHR34183; -; 1.
DR PANTHER; PTHR34183:SF1; ENDOLYTIC PEPTIDOGLYCAN TRANSGLYCOSYLASE RLPA; 1.
DR Pfam; PF03330; DPBB_1; 1.
DR Pfam; PF05036; SPOR; 1.
DR SUPFAM; SSF50685; Barwin-like endoglucanases; 1.
DR SUPFAM; SSF110997; Sporulation related repeat; 1.
DR PROSITE; PS51724; SPOR; 1.
PE 3: Inferred from homology;
KW Cell membrane {ECO:0000256|ARBA:ARBA00022475};
KW Cell wall biogenesis/degradation {ECO:0000256|ARBA:ARBA00023316,
KW ECO:0000256|HAMAP-Rule:MF_02071};
KW Lipoprotein {ECO:0000256|ARBA:ARBA00023288};
KW Lyase {ECO:0000256|ARBA:ARBA00023239, ECO:0000256|HAMAP-Rule:MF_02071};
KW Membrane {ECO:0000256|ARBA:ARBA00023136};
KW Palmitate {ECO:0000256|ARBA:ARBA00023139};
KW Reference proteome {ECO:0000313|Proteomes:UP000245086}.
FT DOMAIN 359..437
FT /note="SPOR"
FT /evidence="ECO:0000259|PROSITE:PS51724"
FT REGION 54..73
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 103..142
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 308..330
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 103..126
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 440 AA; 46666 MW; 833A80669CCFC8E0 CRC64;
MVRKAAQLFH VRKESLRSKI SELRISDHVC FGLIIVVAGF SVSPATVLAA ARTTSAATNS
EAASTEAAPV SKARQATEAD RIAQSHPAAR SVARPITRDA ITSSLTRAAP VERAETQNTS
RATSISLPAR AEREAAASPR NMAAPARISI RASEPETTPS VRPADVQPFQ KIGAPYQVNG
TWYIPAHEPD YDEVGVASWY GRDFHGKATA NGETFDMNVV TAAHPTLPIP SLVEVTNLSN
GRSMVVRIND RGPFVSNRLI DLSARGAELL GYREQGSTQV RVRYIGPADP DPLVTAETLS
PPSLEPKWAE ARASAPKSPP NIPPVRASNA SGPSVAVTVA RVIEQRPSRA VNRDGVASSE
TRAGLYVQAG AFSRQANAER AVRQLSDVGA VQIAESETAS GATLYRVLIG PVRTQAEAQE
LADLVSNRGL SGAHVMASLN
//
