ID A0A2P5E4D0_TREOI Unreviewed; 563 AA.
AC A0A2P5E4D0;
DT 23-MAY-2018, integrated into UniProtKB/TrEMBL.
DT 23-MAY-2018, sequence version 1.
DT 27-MAR-2024, entry version 20.
DE SubName: Full=TFIIH C1-like domain containing protein {ECO:0000313|EMBL:PON80404.1};
GN ORFNames=TorRG33x02_234080 {ECO:0000313|EMBL:PON80404.1};
OS Trema orientale (Charcoal tree) (Celtis orientalis).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Rosales; Cannabaceae; Trema.
OX NCBI_TaxID=63057 {ECO:0000313|EMBL:PON80404.1, ECO:0000313|Proteomes:UP000237000};
RN [1] {ECO:0000313|Proteomes:UP000237000}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. RG33-2 {ECO:0000313|Proteomes:UP000237000};
RA Van Velzen R., Holmer R., Bu F., Rutten L., Van Zeijl A., Liu W.,
RA Santuari L., Cao Q., Sharma T., Shen D., Roswanjaya Y., Wardhani T.,
RA Kalhor M.S., Jansen J., Van den Hoogen J., Gungor B., Hartog M.,
RA Hontelez J., Verver J., Yang W.-C., Schijlen E., Repin R., Schilthuizen M.,
RA Schranz E., Heidstra R., Miyata K., Fedorova E., Kohlen W., Bisseling T.,
RA Smit S., Geurts R.;
RT "Parallel loss of symbiosis genes in relatives of nitrogen-fixing non-
RT legume Parasponia.";
RL Submitted (JUN-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PON80404.1}.
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DR EMBL; JXTC01000231; PON80404.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2P5E4D0; -.
DR STRING; 63057.A0A2P5E4D0; -.
DR InParanoid; A0A2P5E4D0; -.
DR OrthoDB; 5363046at2759; -.
DR Proteomes; UP000237000; Unassembled WGS sequence.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:UniProt.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 2.
DR InterPro; IPR031140; IDD1-16.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR PANTHER; PTHR10593; SERINE/THREONINE-PROTEIN KINASE RIO; 1.
DR PANTHER; PTHR10593:SF250; ZINC FINGER PROTEIN JACKDAW; 1.
DR Pfam; PF00096; zf-C2H2; 1.
DR SMART; SM00355; ZnF_C2H2; 3.
DR SUPFAM; SSF57667; beta-beta-alpha zinc fingers; 1.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 1.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00042};
KW Reference proteome {ECO:0000313|Proteomes:UP000237000};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00042};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00042}.
FT DOMAIN 60..82
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT REGION 330..357
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 371..392
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 466..488
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 371..391
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 563 AA; 61435 MW; 9322F1A611673C27 CRC64;
MVLAPPSEGL LKNQIQTLTL TLIRIHQLIR RREIYLETQA NPDAEVIALS PKSLMATNRF
ICEICNKGFQ RDQNLQLHRR GHNLPWKLRQ RTNKDVVRKK VYVCPEKSCV HHDPSRALGD
LTGIKKHFSR KHGEKKWKCE KCSKKYAVQS DWKAHTKVCG TREYKCDCGT LFSRKDSFIT
HRAFCDALAE ENARFGTTAV PNTNILPSFI NNNINNPQTA ASRMTHPHLS PIFQPEFGSE
SVANFGSNAT GDIRPRLPLW LDPSNSHQLN SNNIPFLSAT GGNSPSVGGG FPELLQTAAA
TATLFGGQPS SAPPQISHHQ WLNKFSSAHD HQGATTFPTM SSSLLPPPGL KEEEETKGNN
IKNSISLSES MMTTTSSLHP NNQSPQLQGP APHMSATALL QKAAQMGSTR SNNASSFSGS
AFGLISSLSS SSSNSHKQVL FRQPVNHQST AAENNFNDLV NSLQAASSDN ANNNNNNNNN
GPAAVLSSPS SFNLKQAAAA QSLSANNNEN HDIDEHSLTR DFLGVGGDGH HIHGNGSNFF
QQELEKFASM GSAMNLSQFS GHH
//
