ID A0A2P5FFY1_TREOI Unreviewed; 436 AA.
AC A0A2P5FFY1;
DT 23-MAY-2018, integrated into UniProtKB/TrEMBL.
DT 23-MAY-2018, sequence version 1.
DT 27-MAR-2024, entry version 22.
DE SubName: Full=Paraneoplastic encephalomyelitis antigen {ECO:0000313|EMBL:PON96676.1};
GN ORFNames=TorRG33x02_076570 {ECO:0000313|EMBL:PON96676.1};
OS Trema orientale (Charcoal tree) (Celtis orientalis).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Rosales; Cannabaceae; Trema.
OX NCBI_TaxID=63057 {ECO:0000313|EMBL:PON96676.1, ECO:0000313|Proteomes:UP000237000};
RN [1] {ECO:0000313|Proteomes:UP000237000}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. RG33-2 {ECO:0000313|Proteomes:UP000237000};
RA Van Velzen R., Holmer R., Bu F., Rutten L., Van Zeijl A., Liu W.,
RA Santuari L., Cao Q., Sharma T., Shen D., Roswanjaya Y., Wardhani T.,
RA Kalhor M.S., Jansen J., Van den Hoogen J., Gungor B., Hartog M.,
RA Hontelez J., Verver J., Yang W.-C., Schijlen E., Repin R., Schilthuizen M.,
RA Schranz E., Heidstra R., Miyata K., Fedorova E., Kohlen W., Bisseling T.,
RA Smit S., Geurts R.;
RT "Parallel loss of symbiosis genes in relatives of nitrogen-fixing non-
RT legume Parasponia.";
RL Submitted (JUN-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PON96676.1}.
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DR EMBL; JXTC01000037; PON96676.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2P5FFY1; -.
DR STRING; 63057.A0A2P5FFY1; -.
DR InParanoid; A0A2P5FFY1; -.
DR OrthoDB; 3363347at2759; -.
DR Proteomes; UP000237000; Unassembled WGS sequence.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR CDD; cd12361; RRM1_2_CELF1-6_like; 1.
DR CDD; cd12362; RRM3_CELF1-6; 1.
DR Gene3D; 3.30.70.330; -; 3.
DR InterPro; IPR002343; Hud_Sxl_RNA.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR PANTHER; PTHR24012:SF690; BRUNO 1, ISOFORM B-RELATED; 1.
DR PANTHER; PTHR24012; RNA BINDING PROTEIN; 1.
DR Pfam; PF00076; RRM_1; 3.
DR PRINTS; PR00961; HUDSXLRNA.
DR SMART; SM00360; RRM; 3.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 2.
DR PROSITE; PS50102; RRM; 3.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000237000};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00176}.
FT DOMAIN 17..98
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 105..185
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 351..429
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 191..210
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 307..346
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 195..210
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 314..345
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 436 AA; 47161 MW; 659B7963023FC65B CRC64;
MAEGGKKERK SSSEESVKLF VGQVPKHMTE AQLLAMFQEF ALVDEVNIIK DKVTRASRGC
CFVICPSRQE ADKAVNACHN KKTLPGASTP LQVKYADGEL ERLEHKLFVG MLPKNVSETE
VSALFSTYGT IKDLQILRGS QQTSKGCAFL KYETKEQALA ALEAINGKHK MEGSSVPLVV
KWADTEKERQ ARKAQKAQSQ ASNVPSADSQ HPSLFGALPI GYVPPYNGYG YQAPGTYGLM
QYRLSPMQNQ GFHNMIPQVN QGNALRGISP DLTPNLGPRN FGMPPANYVG SAYPTMPGLQ
HPMAYPGGMM SHRPLSSSPG SVQPSVVSSN SASSPGTSKN SGGQVEGPPG ANLFIYHIPQ
EFGDQELANA FQAFGRVLSA KVFVDKATGV SKCFGFVSYD SPEAAQSAIS MMNGFQLGGK
KLKVQLKRDN KQNKPY
//
