ID A0A2P5FZA7_TREOI Unreviewed; 359 AA.
AC A0A2P5FZA7;
DT 23-MAY-2018, integrated into UniProtKB/TrEMBL.
DT 23-MAY-2018, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE SubName: Full=Ribonuclease H-like domain containing protein {ECO:0000313|EMBL:POO03125.1};
DE Flags: Fragment;
GN ORFNames=TorRG33x02_011860 {ECO:0000313|EMBL:POO03125.1};
OS Trema orientale (Charcoal tree) (Celtis orientalis).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Rosales; Cannabaceae; Trema.
OX NCBI_TaxID=63057 {ECO:0000313|EMBL:POO03125.1, ECO:0000313|Proteomes:UP000237000};
RN [1] {ECO:0000313|Proteomes:UP000237000}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. RG33-2 {ECO:0000313|Proteomes:UP000237000};
RA Van Velzen R., Holmer R., Bu F., Rutten L., Van Zeijl A., Liu W.,
RA Santuari L., Cao Q., Sharma T., Shen D., Roswanjaya Y., Wardhani T.,
RA Kalhor M.S., Jansen J., Van den Hoogen J., Gungor B., Hartog M.,
RA Hontelez J., Verver J., Yang W.-C., Schijlen E., Repin R., Schilthuizen M.,
RA Schranz E., Heidstra R., Miyata K., Fedorova E., Kohlen W., Bisseling T.,
RA Smit S., Geurts R.;
RT "Parallel loss of symbiosis genes in relatives of nitrogen-fixing non-
RT legume Parasponia.";
RL Submitted (JUN-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:POO03125.1}.
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DR EMBL; JXTC01000003; POO03125.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2P5FZA7; -.
DR STRING; 63057.A0A2P5FZA7; -.
DR InParanoid; A0A2P5FZA7; -.
DR OrthoDB; 1126810at2759; -.
DR Proteomes; UP000237000; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR003656; Znf_BED.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR PANTHER; PTHR46481:SF4; ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 39; 1.
DR PANTHER; PTHR46481; ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4; 1.
DR Pfam; PF02892; zf-BED; 1.
DR SMART; SM00614; ZnF_BED; 1.
DR SUPFAM; SSF57667; beta-beta-alpha zinc fingers; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50808; ZF_BED; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000237000};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00027}.
FT DOMAIN 60..123
FT /note="BED-type"
FT /evidence="ECO:0000259|PROSITE:PS50808"
FT REGION 26..59
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 101..127
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 31..59
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 359
FT /evidence="ECO:0000313|EMBL:POO03125.1"
SQ SEQUENCE 359 AA; 40671 MW; 01180A4E20093109 CRC64;
MDMSKNIPID LEMDEEDQIR IVEEGDQVPE MRTNPNASGS CSQFQDSCSP SASTTSKRAR
TTSDVWDHFD PEFKDEAGGK KTKIARCKYC KKLLTAKPSS GTAHLKRHSD TCVNKHKKNN
EPTQSTLQLN KDGSVSSWNY DPIVARESLA RLIAIKDLPL GFGDCNSYED HIRTSYYPNY
KRVSRNTTRS DLIKVYENML KDLITELTSL NFCIALTSDI WGANSKQDYL SVVAHYLDSR
WIMQKRIIGF RVVDNKHTAE IIRDRILNVI EEYGIANRII SITLDNASAN TKAIKLLSNL
ISSYTGGFLL HQRCACHIIN LIVKSSMDVI SVYIENIRSA IAYIHASNPR IAEFKRYCV
//
