ID A0A2P6QHD3_ROSCH Unreviewed; 387 AA.
AC A0A2P6QHD3;
DT 23-MAY-2018, integrated into UniProtKB/TrEMBL.
DT 23-MAY-2018, sequence version 1.
DT 27-MAR-2024, entry version 17.
DE SubName: Full=Putative 1-deoxy-D-xylulose-5-phosphate synthase chromatin regulator PHD family {ECO:0000313|EMBL:PRQ33584.1};
DE EC=2.2.1.7 {ECO:0000313|EMBL:PRQ33584.1};
GN ORFNames=RchiOBHm_Chr5g0059241 {ECO:0000313|EMBL:PRQ33584.1};
OS Rosa chinensis (China rose).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis;
OC Rosa.
OX NCBI_TaxID=74649 {ECO:0000313|EMBL:PRQ33584.1, ECO:0000313|Proteomes:UP000238479};
RN [1] {ECO:0000313|EMBL:PRQ33584.1, ECO:0000313|Proteomes:UP000238479}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Old Blush {ECO:0000313|Proteomes:UP000238479};
RA Bendahmane M.;
RT "The Rosa genome provides new insights in the design of modern roses.";
RL Nat. Genet. 0:0-0(2018).
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC Evidence={ECO:0000256|ARBA:ARBA00001946};
CC -!- COFACTOR:
CC Name=thiamine diphosphate; Xref=ChEBI:CHEBI:58937;
CC Evidence={ECO:0000256|ARBA:ARBA00001964};
CC -!- SUBUNIT: Homodimer. {ECO:0000256|ARBA:ARBA00011738}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PRQ33584.1}.
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DR EMBL; PDCK01000043; PRQ33584.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2P6QHD3; -.
DR STRING; 74649.A0A2P6QHD3; -.
DR EnsemblPlants; PRQ33584; PRQ33584; RchiOBHm_Chr5g0059241.
DR Gramene; PRQ33584; PRQ33584; RchiOBHm_Chr5g0059241.
DR OrthoDB; 1218851at2759; -.
DR Proteomes; UP000238479; Chromosome 5.
DR GO; GO:0008661; F:1-deoxy-D-xylulose-5-phosphate synthase activity; IEA:UniProtKB-EC.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0016114; P:terpenoid biosynthetic process; IEA:InterPro.
DR Gene3D; 3.40.50.970; -; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 2.
DR InterPro; IPR005477; Dxylulose-5-P_synthase.
DR InterPro; IPR029061; THDP-binding.
DR InterPro; IPR049557; Transketolase_CS.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR46235; PHD FINGER-CONTAINING PROTEIN DDB_G0268158; 1.
DR PANTHER; PTHR46235:SF3; PHD FINGER-CONTAINING PROTEIN DDB_G0268158; 1.
DR Pfam; PF13292; DXP_synthase_N; 1.
DR SMART; SM00249; PHD; 3.
DR SUPFAM; SSF52518; Thiamin diphosphate-binding fold (THDP-binding); 1.
DR PROSITE; PS00801; TRANSKETOLASE_1; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000238479};
KW Thiamine pyrophosphate {ECO:0000256|ARBA:ARBA00023052};
KW Transferase {ECO:0000256|ARBA:ARBA00022679, ECO:0000313|EMBL:PRQ33584.1};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
FT DOMAIN 132..189
FT /note="Zinc finger PHD-type"
FT /evidence="ECO:0000259|SMART:SM00249"
FT DOMAIN 194..260
FT /note="Zinc finger PHD-type"
FT /evidence="ECO:0000259|SMART:SM00249"
FT DOMAIN 261..330
FT /note="Zinc finger PHD-type"
FT /evidence="ECO:0000259|SMART:SM00249"
SQ SEQUENCE 387 AA; 44025 MW; F218E72AA842D1DA CRC64;
MKMFCLKASA SNSDGEDRKL TRKEKDGGCK IEYTTEKPAT PLLDTINYPA HMKNLSTQDL
EQLAAELRMD IVHSVSQTGG HLSFSLGVVE LSVALHHVFS TPDDKIIWDV GHQDIQVRKK
PGLSTDDIFD TVCAFCDNGG SLLCCEGRCL RSFHATVKDG EGFTCESLGF SQDEVDAIRK
IDFYCKNCQY KQHQCYACGR LGSSDKSLGA EVFPCTSARC GQFYHPHCIA KLRYHETGVS
AEELEKRIML GESFTCPIHK CWFCKQGENK KDPELQFAVC RRCPTSYHRK CLPRDIRFAK
GKEGDEEDMD TRAWEGLLPD RVLIYCMYLQ KHSFDSMFIL KAFTYKHCSK SSSSDNIYSQ
SKQSTTWFFY LNPSLSRNQI YCKQLEC
//
