ID A0A2P6QLE2_ROSCH Unreviewed; 1244 AA.
AC A0A2P6QLE2;
DT 23-MAY-2018, integrated into UniProtKB/TrEMBL.
DT 23-MAY-2018, sequence version 1.
DT 27-MAR-2024, entry version 23.
DE SubName: Full=Putative transcription factor WD40-like family {ECO:0000313|EMBL:PRQ34991.1};
GN ORFNames=RchiOBHm_Chr5g0075171 {ECO:0000313|EMBL:PRQ34991.1};
OS Rosa chinensis (China rose).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis;
OC Rosa.
OX NCBI_TaxID=74649 {ECO:0000313|EMBL:PRQ34991.1, ECO:0000313|Proteomes:UP000238479};
RN [1] {ECO:0000313|EMBL:PRQ34991.1, ECO:0000313|Proteomes:UP000238479}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Old Blush {ECO:0000313|Proteomes:UP000238479};
RA Bendahmane M.;
RT "The Rosa genome provides new insights in the design of modern roses.";
RL Nat. Genet. 0:0-0(2018).
CC -!- SUBCELLULAR LOCATION: Cytoplasm, P-body
CC {ECO:0000256|ARBA:ARBA00004201}.
CC -!- SIMILARITY: Belongs to the WD repeat EDC4 family.
CC {ECO:0000256|ARBA:ARBA00009639}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PRQ34991.1}.
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DR EMBL; PDCK01000043; PRQ34991.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2P6QLE2; -.
DR STRING; 74649.A0A2P6QLE2; -.
DR EnsemblPlants; PRQ34991; PRQ34991; RchiOBHm_Chr5g0075171.
DR Gramene; PRQ34991; PRQ34991; RchiOBHm_Chr5g0075171.
DR OMA; VIAMHVK; -.
DR OrthoDB; 1222077at2759; -.
DR Proteomes; UP000238479; Chromosome 5.
DR GO; GO:0000932; C:P-body; IEA:UniProtKB-SubCell.
DR GO; GO:0031087; P:deadenylation-independent decapping of nuclear-transcribed mRNA; IEA:InterPro.
DR Gene3D; 1.10.220.100; conserved c-terminal region of ge- 1; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 1.
DR InterPro; IPR045152; EDC4-like.
DR InterPro; IPR049404; EDC4_C.
DR InterPro; IPR044938; EDC4_C_sf.
DR InterPro; IPR032401; EDC4_WD40.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR15598; ENHANCER OF MRNA-DECAPPING PROTEIN 4; 1.
DR PANTHER; PTHR15598:SF5; ENHANCER OF MRNA-DECAPPING PROTEIN 4; 1.
DR Pfam; PF21289; EDC4_C; 1.
DR Pfam; PF16529; Ge1_WD40; 1.
DR SMART; SM00320; WD40; 2.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054};
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW Reference proteome {ECO:0000313|Proteomes:UP000238479};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT DOMAIN 78..390
FT /note="Enhancer of mRNA-decapping protein 4 WD40 repeat
FT region"
FT /evidence="ECO:0000259|Pfam:PF16529"
FT REPEAT 244..286
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT DOMAIN 1112..1216
FT /note="Enhancer of mRNA-decapping protein 4 C-terminal"
FT /evidence="ECO:0000259|Pfam:PF21289"
FT REGION 1..25
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 457..524
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 544..568
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 727..814
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 458..490
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 501..521
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 550..568
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 754..807
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1244 AA; 134796 MW; 66E36A2E9E2E32AC CRC64;
MALLGAPSSG LEMAPQPELS VPGSGGVSMV PTLPMGIPPS PARMPSNKLP KGRHLIGDSV
VYDVDVRLPG EFQPQLEVTP ITKYGSDPQL VLGRQIAVNK SYICYGLKQG NIRVLNIHTA
LRSLFRAHTQ RVTDMAFFAE DVHLLASVSV EGRLFVWKIS EGPDEEGTPQ ITGKIVIAIQ
IVGEGEAVHP RVCWHCHKQE VLVVGIGKRV LRIDTTKVAK GEVPSAEDPI KCPVEKLVDG
VQFVGKHDGE VTDLSMCQWM TTRLVSASMD GTIKIWEDRK SQPLLVLRPY DGLPVYSSTF
VTAPNRPDHI ILITVGPLNR EVKIWSSESE EGWLLPSDAE SWKCTQTLEL KSSAQPRVED
AFFNQVIALS QAGLLLLANA KKNAIYAVHL DFGGEPASTR MDYIAEFTVT MPILSFTGTS
ISPHGEQIVQ VYCVQTQAIQ QYALDLSKCL PPPLENSGLE KSDSSFSHDA TEAVSTNSAP
KPTIQATSSE GAALRYPVRT ASVDPSNSKD ITTSSMESKP VASAPEISDA DTVFVASQPL
PLSPRLSGKL SGLRSPTGSS DHGGDQQVNE YSVDRQMNTA RSNLSDMPAL DDDARNDEQK
IAQDEVSSVL NPPIMFKHPT HLITPSEILM AASSSENTNP IDSNTEGDAK IQDVLVNSDV
GNPEVEVKVV GETRSTQIDE FGSQRELQNV VSENKEKFFC SQASDLGIEM ARDCCAISSE
SYITDEARQG DGASMSEPLA QPHSGEEDQD LSTKDVSGSA TATTTSQTPN AKSRKQKWKN
MQASGPSAPS PGVLNVVESS NEAGGSASPP SGEAAFPQIM AMQDMMNQLM TMQKELQKQM
TMMVTVPITK EGKRLEAALG RSMEKAVKAN NDALWARFQE ENAKNEKLLR DRTQQVTSLI
NNFVNKDFPV MLEKTVKKEI AAVGPAVVRA ITPAMEKTIP LAISDCFQRG VGDKAVNQLE
KSVNSKLEAT VSRQIQAQFQ TSGKQALQDA LKSSMEASVV PAFEKSCKAM FEQVDATFQK
GMVEHATVAQ QHFESAHSPL AHALREAISS ASSVTQTLSG ELADGQRKLV ALAAARGNSS
AVNPLVTQLT NGPLGGLHEK VEVPLDPTKE LSRLVTERKY EEAFTGALQR SDVGIVSWLC
AQVDLHGILL LQPVPLSQGV LLSLLQQLAC DINNDTPRKV AWMTDVAAAI NPSNQMIAMH
VRPIFEQVYQ ILHHQHSLPT ISSAEHASLR LLMHVINSMM MACK
//
