ID A0A2P6QND9_ROSCH Unreviewed; 619 AA.
AC A0A2P6QND9;
DT 23-MAY-2018, integrated into UniProtKB/TrEMBL.
DT 23-MAY-2018, sequence version 1.
DT 27-MAR-2024, entry version 15.
DE SubName: Full=Putative nucleotidyltransferase, Ribonuclease H {ECO:0000313|EMBL:PRQ35711.1};
DE EC=2.7.7.- {ECO:0000313|EMBL:PRQ35711.1};
DE EC=3.1.26.4 {ECO:0000313|EMBL:PRQ35711.1};
GN ORFNames=RchiOBHm_Chr5g0082941 {ECO:0000313|EMBL:PRQ35711.1};
OS Rosa chinensis (China rose).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis;
OC Rosa.
OX NCBI_TaxID=74649 {ECO:0000313|EMBL:PRQ35711.1, ECO:0000313|Proteomes:UP000238479};
RN [1] {ECO:0000313|EMBL:PRQ35711.1, ECO:0000313|Proteomes:UP000238479}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Old Blush {ECO:0000313|Proteomes:UP000238479};
RA Bendahmane M.;
RT "The Rosa genome provides new insights in the design of modern roses.";
RL Nat. Genet. 0:0-0(2018).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PRQ35711.1}.
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DR EMBL; PDCK01000043; PRQ35711.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2P6QND9; -.
DR STRING; 74649.A0A2P6QND9; -.
DR EnsemblPlants; PRQ35711; PRQ35711; RchiOBHm_Chr5g0082941.
DR Gramene; PRQ35711; PRQ35711; RchiOBHm_Chr5g0082941.
DR OMA; HATIGMS; -.
DR Proteomes; UP000238479; Chromosome 5.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0016779; F:nucleotidyltransferase activity; IEA:UniProtKB-KW.
DR GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:UniProtKB-EC.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR CDD; cd09274; RNase_HI_RT_Ty3; 1.
DR Gene3D; 1.10.340.70; -; 1.
DR Gene3D; 2.40.50.40; -; 1.
DR Gene3D; 3.10.20.370; -; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR016197; Chromo-like_dom_sf.
DR InterPro; IPR000953; Chromo/chromo_shadow_dom.
DR InterPro; IPR023780; Chromo_domain.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR041588; Integrase_H2C2.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR041373; RT_RNaseH.
DR PANTHER; PTHR45835:SF103; INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR45835; YALI0A06105P; 1.
DR Pfam; PF00385; Chromo; 1.
DR Pfam; PF17921; Integrase_H2C2; 1.
DR Pfam; PF17917; RT_RNaseH; 1.
DR SUPFAM; SSF54160; Chromo domain-like; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50013; CHROMO_2; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
PE 4: Predicted;
KW Hydrolase {ECO:0000313|EMBL:PRQ35711.1};
KW Nucleotidyltransferase {ECO:0000313|EMBL:PRQ35711.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000238479};
KW Transferase {ECO:0000313|EMBL:PRQ35711.1}.
FT DOMAIN 261..425
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
FT DOMAIN 569..619
FT /note="Chromo"
FT /evidence="ECO:0000259|PROSITE:PS50013"
SQ SEQUENCE 619 AA; 71187 MW; 2C0CC072341797A9 CRC64;
MTAPVLALPD FSKPFVVETD ASGLGIGAVL SQQRHPIAFL SKSLSPRNQA LSVYDKEMLA
VLFAIEKWRP YLLGHPFQIL TDHQTLKHLL NQRISTPSQH KWLAKLMGYN YTIEYRAGSA
NTVPDLLSRR HELCPLQAVS APVFDCLPQI DQACLRDQHA QVIISQLQQG LTAKKGFSWS
NNRLLYKGKV FVPVSSDWRT KLLYEFHSSL QAGHSGYLRT YLRLFRNFAW PGMRKEIKSF
IAECDQCQRQ TYETIKPPGL LQPLPIPENI WFDISMDFVD GLPPSDGKNA IFVVVDRLSK
YGHFIAISHP YSATQIAEVF MKEVFRLHGM PKSIVSDRDP IFISHFWTAF FKLQGTTLCR
SSAYHPQTDG QTEVVNRSLE HYLRCFVLDK PSSWPTLLHW AEWWYNSTYH STIRMTPFQA
VYGIPPPSVA MYVPGSTSVQ KVDKALQDRN VLVQSLKIHM AATQNRMKQS ADQHRTERVF
NIGEWVFLKL HPYRQQSLVK RAVHKLSPRY YGPFLILERI GKVAYKLELP PQCRIHPIFH
VSLLKLRIGD GTPFTTSLPE FDDQGDLLWR PEKVLDLAVV RKKKRNITQW LIQWAGLPAE
DATWEDAHTI KHRFPEFCA
//
