ID A0A2P6RIS5_ROSCH Unreviewed; 1134 AA.
AC A0A2P6RIS5;
DT 23-MAY-2018, integrated into UniProtKB/TrEMBL.
DT 23-MAY-2018, sequence version 1.
DT 24-JAN-2024, entry version 19.
DE SubName: Full=Putative transcription factor WD40-like family {ECO:0000313|EMBL:PRQ46323.1};
GN ORFNames=RchiOBHm_Chr2g0087841 {ECO:0000313|EMBL:PRQ46323.1};
OS Rosa chinensis (China rose).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis;
OC Rosa.
OX NCBI_TaxID=74649 {ECO:0000313|EMBL:PRQ46323.1, ECO:0000313|Proteomes:UP000238479};
RN [1] {ECO:0000313|EMBL:PRQ46323.1, ECO:0000313|Proteomes:UP000238479}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Old Blush {ECO:0000313|Proteomes:UP000238479};
RA Bendahmane M.;
RT "The Rosa genome provides new insights in the design of modern roses.";
RL Nat. Genet. 0:0-0(2018).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PRQ46323.1}.
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DR EMBL; PDCK01000040; PRQ46323.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2P6RIS5; -.
DR STRING; 74649.A0A2P6RIS5; -.
DR EnsemblPlants; PRQ46323; PRQ46323; RchiOBHm_Chr2g0087841.
DR Gramene; PRQ46323; PRQ46323; RchiOBHm_Chr2g0087841.
DR OMA; RFNKEGM; -.
DR OrthoDB; 2508083at2759; -.
DR Proteomes; UP000238479; Chromosome 2.
DR GO; GO:0009791; P:post-embryonic development; IEA:UniProt.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR GO; GO:0048608; P:reproductive structure development; IEA:UniProt.
DR GO; GO:0048367; P:shoot system development; IEA:UniProt.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 3.
DR InterPro; IPR006595; CTLH_C.
DR InterPro; IPR006594; LisH.
DR InterPro; IPR027728; Topless_fam.
DR InterPro; IPR048419; Topless_Znf.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR44083:SF35; TOPLESS-RELATED PROTEIN 1-LIKE ISOFORM X1; 1.
DR PANTHER; PTHR44083; TOPLESS-RELATED PROTEIN 1-RELATED; 1.
DR Pfam; PF00400; WD40; 3.
DR Pfam; PF21359; zf_topless; 1.
DR SMART; SM00668; CTLH; 1.
DR SMART; SM00667; LisH; 1.
DR SMART; SM00320; WD40; 10.
DR SUPFAM; SSF50978; WD40 repeat-like; 2.
DR PROSITE; PS50897; CTLH; 1.
DR PROSITE; PS50896; LISH; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 2.
DR PROSITE; PS50294; WD_REPEATS_REGION; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000238479};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT DOMAIN 34..92
FT /note="CTLH"
FT /evidence="ECO:0000259|PROSITE:PS50897"
FT REPEAT 459..502
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 923..964
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REGION 1100..1134
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1109..1134
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1134 AA; 124386 MW; FBE03478542EB2D5 CRC64;
MSSLSRELVF LILQFLDEEK FKESVHKLEQ ESGFFFNMRY FEDMVTNGEW EEVEKYLSGF
TKVDDNRYSM KIFFEIRKQK YLEALDKRDR AKAVDILVKD LKVFAAFNEE LFKEITQLLT
LDNFRDNEQL SKYGDTKSAR GIMLAELKKL IEANPLFRDK LQFPTLKNSR LRTLINQSLN
WQHQLCKNPR PNPDIKTLFV DHSCGQPNGA RAPSPVTNHL MGAVPKTGGF PPLGAHGPFQ
PTPAALPTSL AGWMANSSPV PHPSASAGPM GLAAANNAGA LLKRPRTPPT NNPAMDYQTA
DSEHVMKRSR PFGVTDEANN LPVNILPVAY PNQSHGQSSY STDDLPRNVV MTINPGSSVK
SMDFHPVQQI LLLVGTNMGD VMVYELPSHE RIANRNFKAW DLATCSVALQ ATLANDYTAS
INRVVWSPDG TLFGVAYSKH LVHIYSYHGG DDLRNHLEIE AHAGSVNDLA FSYPNKQLCV
VTCGEDRVIK VWDAVTGAKQ HTFEGHEAPV YSVCPHHKES IQFIFSTATD GKIKAWLYDN
VGSRVDYDAP GHSSTTMAYS ADGSRLFSCG TNKEGDSYLV EWNESEGAVK RTYHGLGKRT
VGVVQFDTTK NRFLAAGDEF MVKFWDMDSV NLLTSTDADG GLPASPSIRF NKEGILLAVS
TNDNGIKILA NSDGIRLLRT VESRTFDASR AASVAVVKAP AIGAFGSSNI TVGTGIGDRA
APVPAMVGLN NDSRSLADVK PRIVDESIEK SRIWKLTEIN EPSQCRSLRL PDNLTAMRVS
RLIYTNSGLA ILALSSNAVH KLWKWQRNDR TTIGKATASI VPQLWQPASG ILMTNDISDT
NPEDAVPCFA LSKNDSYVMS ASGGKISLFN MMTFKTMTTF MPPPPAATYL AFHPQDNNII
AIGMEDSSIQ IYNVRVDEVK TKLKGHQKRI TGLAFSHVLN VLVSSGADSQ LCVWNTDGWE
RQASKFLQIP SGRAAAPLAD TRVQFHLDQI HLLAVHETQI AIYEAPKLEC LKQWVPREAS
GPITHAAYSC DSQSIYVSFA DGSVGVLTAT TLRLRCRILP AAYLPPNPSL SVYPLVVAAH
PSDPNQFALG LTDGGVHVLE PLESEGKWGT SPPTENGAGP STASGAAGSD QPQR
//