ID A0A2P6SII2_ROSCH Unreviewed; 880 AA.
AC A0A2P6SII2;
DT 23-MAY-2018, integrated into UniProtKB/TrEMBL.
DT 23-MAY-2018, sequence version 1.
DT 27-MAR-2024, entry version 20.
DE SubName: Full=Putative transcription factor C2H2 family {ECO:0000313|EMBL:PRQ58487.1};
GN ORFNames=RchiOBHm_Chr1g0359841 {ECO:0000313|EMBL:PRQ58487.1};
OS Rosa chinensis (China rose).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis;
OC Rosa.
OX NCBI_TaxID=74649 {ECO:0000313|EMBL:PRQ58487.1, ECO:0000313|Proteomes:UP000238479};
RN [1] {ECO:0000313|EMBL:PRQ58487.1, ECO:0000313|Proteomes:UP000238479}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Old Blush {ECO:0000313|Proteomes:UP000238479};
RA Bendahmane M.;
RT "The Rosa genome provides new insights in the design of modern roses.";
RL Nat. Genet. 0:0-0(2018).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PRQ58487.1}.
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DR EMBL; PDCK01000039; PRQ58487.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2P6SII2; -.
DR EnsemblPlants; PRQ58487; PRQ58487; RchiOBHm_Chr1g0359841.
DR Gramene; PRQ58487; PRQ58487; RchiOBHm_Chr1g0359841.
DR OMA; PYSDYTD; -.
DR Proteomes; UP000238479; Chromosome 1.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0032454; F:histone H3K9 demethylase activity; IEA:InterPro.
DR Gene3D; 2.60.120.650; Cupin; 2.
DR InterPro; IPR045109; JHDM2-like.
DR InterPro; IPR003347; JmjC_dom.
DR InterPro; IPR018866; Znf-4CXXC_R1.
DR InterPro; IPR001841; Znf_RING.
DR PANTHER; PTHR12549; JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN; 1.
DR PANTHER; PTHR12549:SF33; JMJC DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF02373; JmjC; 1.
DR Pfam; PF10497; zf-4CXXC_R1; 1.
DR SMART; SM00558; JmjC; 1.
DR SUPFAM; SSF51197; Clavaminate synthase-like; 1.
DR PROSITE; PS51184; JMJC; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000238479};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00175}.
FT DOMAIN 26..73
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT DOMAIN 466..833
FT /note="JmjC"
FT /evidence="ECO:0000259|PROSITE:PS51184"
FT REGION 1..21
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..17
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 880 AA; 100424 MW; 37064BA24E0EDC93 CRC64;
MKKSKLKEEK PMEEGKSNKN KGSLMCHQCQ RNDKSGVVHC SLCKSKRFCY ECIERWYPGK
SREEFEDACP FCRGNCNCKA CLREFLVKPC REVEPSVKLQ RLRYLLYKAL PVLRHIYSEQ
SSELEIEAKI RGVHLTELDI KRTKVHQKER MYCDNCSTSI VDFHRSCPNP NCSYDLCLTC
CKELRDGRQP GGNEGETSHQ QALERAHKEV KGHCSESKVA STSDDSKVDP SISFPNWRAD
SDGSIPCPPK ERGGCGNGKL ELRRKFKANW VMKLLKNAED VTTDFKWQEV DISQGCSWCQ
PNDSEETNDR KPERRQAAFR KNSHDNFLYC SDAIDISDDE IEHFQRHWMK GEPVIVRNVL
DKTSGLSWEP MVMWRAFRET GAKVKFKEET KSVKAIDCLD WNEVEINIHQ FFTGYLAGRM
HKDKWPEMLK LKDWPSSTLF EERLPRHCAE FIAALPYSDY TDPKDSNAGI LNLATRLPEG
SLKPDMGPKT YIAYGFSEEL GRGDSVTKLH CDMSDAVNVL THTATVKIEP WQHNAIKNVK
SKHEAEDLCD LYNEKNHKKG RVRGTLLKKT RNVLVKGADS SEYTKSGKVV ENDHLVSTLQ
DGKGNKLDRA QSCRTSLLSD SVDPGILRSD ETEHVPEPLA TTELNEVKVA SVGHQRNDVL
KSTSPRANGV EKEQECAQCS SDMISGRLEG KDASRDASVN THATKDFKGS DKLDIVHGGA
VWDIFRIQDT PKLIEYLEKH KKEFRHLNNH PVDSVVHPIH DQTLYLNERH KKQLKEEFDV
EPWTFEQHLG EAVFIPAGCP HQVRNRQSCI KVALDFVSPE NLEVCLRLTE EFRLLPKTHR
AKEDKLEVKK MTLYAVSSAL REAKNLMPGL GTSNAEKDDK
//