ID A0A2P6SLV1_ROSCH Unreviewed; 1670 AA.
AC A0A2P6SLV1;
DT 23-MAY-2018, integrated into UniProtKB/TrEMBL.
DT 23-MAY-2018, sequence version 1.
DT 27-MAR-2024, entry version 23.
DE SubName: Full=Putative DNA helicase chromatin regulator PHD family {ECO:0000313|EMBL:PRQ59652.1};
DE EC=3.6.4.12 {ECO:0000313|EMBL:PRQ59652.1};
GN ORFNames=RchiOBHm_Chr1g0372551 {ECO:0000313|EMBL:PRQ59652.1};
OS Rosa chinensis (China rose).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis;
OC Rosa.
OX NCBI_TaxID=74649 {ECO:0000313|EMBL:PRQ59652.1, ECO:0000313|Proteomes:UP000238479};
RN [1] {ECO:0000313|EMBL:PRQ59652.1, ECO:0000313|Proteomes:UP000238479}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Old Blush {ECO:0000313|Proteomes:UP000238479};
RA Bendahmane M.;
RT "The Rosa genome provides new insights in the design of modern roses.";
RL Nat. Genet. 0:0-0(2018).
CC -!- SIMILARITY: Belongs to the SNF2/RAD54 helicase family. RAD16 subfamily.
CC {ECO:0000256|ARBA:ARBA00008438}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PRQ59652.1}.
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DR EMBL; PDCK01000039; PRQ59652.1; -; Genomic_DNA.
DR STRING; 74649.A0A2P6SLV1; -.
DR EnsemblPlants; PRQ59652; PRQ59652; RchiOBHm_Chr1g0372551.
DR Gramene; PRQ59652; PRQ59652; RchiOBHm_Chr1g0372551.
DR OMA; QLFEQMC; -.
DR OrthoDB; 8175at2759; -.
DR Proteomes; UP000238479; Chromosome 1.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0140658; F:ATP-dependent chromatin remodeler activity; IEA:InterPro.
DR GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd18070; DEXQc_SHPRH; 1.
DR CDD; cd15517; PHD_TCF19_like; 1.
DR CDD; cd18793; SF2_C_SNF; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.40.50.10810; Tandem AAA-ATPase domain; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 2.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR048686; SHPRH_helical_1st.
DR InterPro; IPR048695; SHPRH_helical_2nd.
DR InterPro; IPR038718; SNF2-like_sf.
DR InterPro; IPR049730; SNF2/RAD54-like_C.
DR InterPro; IPR000330; SNF2_N.
DR InterPro; IPR019786; Zinc_finger_PHD-type_CS.
DR InterPro; IPR018957; Znf_C3HC4_RING-type.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR45865:SF1; E3 UBIQUITIN-PROTEIN LIGASE SHPRH; 1.
DR PANTHER; PTHR45865; E3 UBIQUITIN-PROTEIN LIGASE SHPRH FAMILY MEMBER; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF21325; SHPRH_helical-1st; 1.
DR Pfam; PF21324; SHPRH_helical-2nd; 1.
DR Pfam; PF00176; SNF2-rel_dom; 1.
DR Pfam; PF00097; zf-C3HC4; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SMART; SM00249; PHD; 1.
DR SMART; SM00184; RING; 1.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
DR PROSITE; PS01359; ZF_PHD_1; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000313|EMBL:PRQ59652.1};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000313|EMBL:PRQ59652.1};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000238479};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00175}.
FT DOMAIN 1347..1396
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT DOMAIN 1445..1621
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 1..39
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1156..1181
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1670 AA; 187450 MW; 593A3492236B4254 CRC64;
MGRRKQSRPH RSGGIVLESQ ATAGRGELDE GRLLNGETQK NDIDEVDRPY FVEVDRSNWG
SDEHLDIAEV VLTDLTFREG FCSDVFSGGL NCDSYSLRFR LSNVKEFIGR IKLGHWPLLS
SADISLEFVK TCSSEYMDMD KDTCSVILSG SFDGPDEGIS GLVHLASLKF MTLRPALSIG
FVNDTSTIRV RVEILKSAFN ACESLLDNTR QVWKKSMMNV MAWLHPEVVT SEARYGVSRS
TDMEIDSHTD TGHANSNHSK HARFDVAGFY EAIKPSKADT MLQDVLPDLL PELKPYQRRA
AYWMVQREKS DAQSLAQEAT SQFMSPLCLP LQFLDRCSKM FYNPFSGNVS LHQEHFSTYV
SGGILADEMG MGKTVELLAC IFAHQKSADE DPIFADAEIQ DTEDLKIKLK RLKRERVECI
CGAVSESIRY RGLWVQCDIC DAWQHADCVG YSPRGKTIKS NETSNEKEHD KSSVVKNYTR
KKNTATIDVR DEEYICQLCS ELIQATTSPV ATGATLIICP ASILPQWYSE IMRHTRSGSL
KTCVYEGVRE ASFSNTSVID ISELISADIV LTTYDVLKAD LSHDSDRHEG DRRLMRFQKR
YPVVPTILTR IFWWRICLDE AQMVESNAGA ATEMAMRLYA KHRWCITGTP IQRKLDDLYG
LLRFLKACPF NASRWWIEVI RDPYERRDAG AMEFTHKFFK EIMWRSSKVH VADELQLPPQ
EECLSWLTLS PVEEHFYQRQ HETCVSYARE VIEHMKDDIM NRKVRGCSAA KSSDSFITHA
EAGKLLNTLL KLRQASCHPQ VGSSGLRSLQ QSPMTMEEIL MVLVSKTKIE GEEALRRLVV
ALNGLAGIAV IEQNFTQAVS LYKESLTLAE EHTEDFRLDP LLNIHIHHNL AEILPLATSC
SPSKGQHIPG KMGPCDEHVA KRRKLGGEDN SSENDLSNAQ EYNNSHASCS SFTDVSLRTV
CDNLKQKYLS AFSSKLFMTQ QEFKKSYTQV CSTISEIKDV STVWWLEALL HAEKNNDISS
LLIRKIEEAL IGTLNNSKSS RIPSRLRSIS ALKYHMQTGL DQLEESRKLL LDRLLEIDQT
MEKPKEEDIQ RVRYCRNCKA NDGGPLCVLC EVDELFRGYE ARLFRLEKIS GGIATSAEEA
VDLQKKNSEL NRFYQNLSQP IKDSTSPKSN QESKKRDVGK VVVSKSPSEL EVVLGVIKSH
CKAHLGKEGI SEATKHLHIL EGMRKEYGHA RSLAIAQAQI LQAYDEINMA TTRLRLSEDE
NDKSLDVLSE DELPSANVLY TSEKFASLSL LSCIKGKLRY LKGLVEAKQK MPFGCPNHSS
VTGEEATIST STEQRNECVP TGDKETCPVC QEQLTIQKMV FPCGHLTCCK CLFAITERLL
NGKKVQDKWV KCPTCRQHTD VANIAFADDG QSESCGSTGL HAIQSREECE ASIIVQGSYG
TKIEAVTRRI LWIKSTDPEA KVLVFSSWND VLDVLEHAFI ANGITSIRMK GGRKSQVAIS
EFKGEKRSLT GNHKLHGRNP EGRSIQVLLL LIQHGANGLN LLEAKHVILV EPLLNPAAEA
QAIGRVHRIG QKNKTLAHRF IVKGTVEESI YKLNKSRNST AFISGNTKNQ DQPLLTLKDI
EALFSTVPSL PVPETDVRPT ESETLRHLPP SVAAAIAAEK RLKEQHSCSS
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