ID A0A2P6TXQ1_CHLSO Unreviewed; 2255 AA.
AC A0A2P6TXQ1;
DT 23-MAY-2018, integrated into UniProtKB/TrEMBL.
DT 23-MAY-2018, sequence version 1.
DT 24-JAN-2024, entry version 20.
DE SubName: Full=PHD-finger family homeodomain {ECO:0000313|EMBL:PRW58843.1};
GN ORFNames=C2E21_2631 {ECO:0000313|EMBL:PRW58843.1};
OS Chlorella sorokiniana (Freshwater green alga).
OC Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Trebouxiophyceae;
OC Chlorellales; Chlorellaceae; Chlorella clade; Chlorella.
OX NCBI_TaxID=3076 {ECO:0000313|EMBL:PRW58843.1, ECO:0000313|Proteomes:UP000239899};
RN [1] {ECO:0000313|EMBL:PRW58843.1, ECO:0000313|Proteomes:UP000239899}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=UTEX 1602 {ECO:0000313|Proteomes:UP000239899};
RX PubMed=29178410; DOI=10.1111/tpj.13789;
RA Arriola M.B., Velmurugan N., Zhang Y., Plunkett M.H., Hondzo H.,
RA Barney B.M.;
RT "Genome sequences of Chlorella sorokiniana UTEX 1602 and Micractinium
RT conductrix SAG 241.80: implications to maltose excretion by a green alga.";
RL Plant J. 93:566-586(2018).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PRW58843.1}.
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DR EMBL; LHPG02000004; PRW58843.1; -; Genomic_DNA.
DR STRING; 3076.A0A2P6TXQ1; -.
DR OrthoDB; 473783at2759; -.
DR Proteomes; UP000239899; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd15504; PHD_PRHA_like; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR016177; DNA-bd_dom_sf.
DR InterPro; IPR001739; Methyl_CpG_DNA-bd.
DR InterPro; IPR045876; PRHA-like_PHD-finger.
DR InterPro; IPR019786; Zinc_finger_PHD-type_CS.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR019787; Znf_PHD-finger.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR12628:SF10; C. ELEGANS HOMEOBOX; 1.
DR PANTHER; PTHR12628; POLYCOMB-LIKE TRANSCRIPTION FACTOR; 1.
DR Pfam; PF01429; MBD; 2.
DR Pfam; PF00628; PHD; 1.
DR SMART; SM00391; MBD; 2.
DR SMART; SM00249; PHD; 1.
DR SUPFAM; SSF54171; DNA-binding domain; 2.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 1.
DR PROSITE; PS50982; MBD; 2.
DR PROSITE; PS01359; ZF_PHD_1; 1.
DR PROSITE; PS50016; ZF_PHD_2; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000313|EMBL:PRW58843.1};
KW Homeobox {ECO:0000256|ARBA:ARBA00023155, ECO:0000313|EMBL:PRW58843.1};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000239899};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00146}.
FT DOMAIN 16..90
FT /note="MBD"
FT /evidence="ECO:0000259|PROSITE:PS50982"
FT DOMAIN 806..878
FT /note="MBD"
FT /evidence="ECO:0000259|PROSITE:PS50982"
FT DOMAIN 1833..1897
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS50016"
FT REGION 68..157
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 351..660
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 705..736
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 925..994
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1072..1092
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1185..1414
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1427..1742
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1959..2087
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 2113..2255
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 225..260
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 1136..1177
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 81..96
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 351..369
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 387..409
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 411..425
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 426..452
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 494..527
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 547..566
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 615..640
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 645..659
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 968..986
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1244..1273
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1380..1404
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1570..1604
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1642..1659
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1660..1674
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1679..1706
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1707..1742
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1961..1976
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 2005..2049
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 2156..2178
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 2191..2216
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 2255 AA; 231024 MW; 7524F8657898506D CRC64;
MATVQSIEAE QLSKLREYIE SLGGRLDGGW RCRANIRDFG SRAGSLDTWF TAPHGETFRS
KVAVARGLGL DTGGAPKPRA PRRPVDPDRP RPVRPPKPPK SEGGAAEGSV PPSERTERGG
SRGPGGGRGS KAPAAPKVKR PRGWNTWTPS EKWQDDPIID ADPAGHLVMG DLAELLLAMP
EADHADEIYD GWLCLMSRNV RDPAVLFAMH LMVPDHPGVM SHYGNEAAVA HLKAAERELR
ERREREIAEA EEQVAAAVQE GLLLPPLPSK QCEGGRCGLQ QDAVSLQLEC SEDGTSVQVQ
LQLVKRRETL CKYCHAALLS AAAAAKAAAD HAAAEAASAE DTSDEEFIHA PSRAAAKVPD
DEEGGNGGGR GRGRGRGRGR GRGGRAAAKR RAAEAAEEER EEGGGGGRGR GRGRGRGRGR
GRGRGRGRKS SQEEEEQQEA SAEGKPEGEE AEEVGSAAAA SSSDEEMPDA DAEEGGRGSG
SASGSSSSSD SEKEEAEEAA DAEEAEEAAG SGKEAEEEEE ASEGADEDGA ELLLSILGKT
RGSRAKRQRS STAPSPAPSE RQQEQPSAAA AAEAADEEMA PAPDAEAEPA AAAAAGPAAT
AAAATAAPLQ QAPPAAAPSS SPAPPPAPVQ LFPPLPGALP LPAAAQQAQQ AQQVHAPPSA
EKQALNLLPK LSERPGTKHL PGTAPAAAVM AAFGVAPLST VGPNAHKQEA ATDNPGAAGA
AGAAGAAPGS APGSAAAAAG ASAASSGRGT PSGATPPGLA AMAAAGLGTP GSLPIPVKLP
KPQPLGNSLR GKSVEEVEKL LMDRLVKYIG DLGQQLPYGW SVKASVRQNG ASAGGVDAYY
YSPHGKRFKS MVKVAEALGF VGVAPAPKVS RGGKKGGLSA GLGGVPFMAG VPPEIAAMFA
ATAAAAGGMG LPPLPLPPLQ AVRSSRPARA TAGGLSLSPE AVGEEEFGEE GGEAVSPSGR
PKRNKPARRR LPGEDASEDE DYFPSSAARR AARSSRDSGA AAAYAAAYAQ MAQQLAAQQA
QQGGEGGEGG TPGLPGLSLP LPAGVTLPMP PGLALPLPPG LTLPLPAGLT LPNMPGAPGS
EGGVSPGGTP EGLTPAAAAA AAAAAAAAYL GGTPPAQRKK CGKCRTCLNP GLKKGCLSIK
QQKHEEEQRL VELQRQLQEL ERVEHKLTTE AEELGLDAAE VAAVKPLPLP PVSESPPSED
NGAGYEYDGQ YSDASDAEEE AANPEEVAAA LAGPQPQPTP QPAAPLTQAQ QAQQLLQQMQ
QLHQLQEAQQ QQAAAAAAAA AAAPPAAQQE QPPQQQQAEA AAAEVAAAAS EALLRQQEQE
QQPPALEAQA PAAAAAGAPS DAAGQQAPWP QMVARPSPRK SGGGGGWNAG DMIRRALAEE
EAQQQQQADA QQEQQQQQQQ QAGEPAEAAA EPMEVDAVPV VVAAPAAEAA APAAAAAEAA
AEPTAELEAA HAVQQQAQEQ APAAVATPAA EQAAAEAKAA AAAPAIAQPP PPVPAAAPAA
VAAAGGGGGG DSDDEEKEEE GEEGGRRGAG GPPADDGPAG GGGGSKRDDD PDASAPGAST
GKRPRQGEQG GRASRNSQQN AGGSRSTGGG GSRSQKSGGD GGSAGGTSRQ AAGGAGGGGG
KRGGGDKDGG KDDGPGKGGK AAGSKAEEEE DGKGKKRRRS DPAPPGRKRP RKPPKAGAPT
PQQAQQAQQQ QAQQQQQQQP QTQEERQKLI DAARKAAQEA AAKKRAEKEK RRKRREELQE
SRNNYDRALG RLRAQLSRLR HEQALVEAYA ADGWRGAARE KVKPVAEIKR AKDQIAKCIE
AIRECVRYCD EAEGDTPIPG HLFDADGELD MAHIFCSKCQ REPVAVASDE ESDEENDIIL
CDGMCNRAYH FKCLVPPLNP AELDEDEGWL CPACDRKMDM IDLINDEFGT TYEDDTPWEQ
VLLPSTLPRS PAQAGLPVGP GSPRAAAVDL NRLEGLLAGA DLPSDDEDDE DYEASSSDSE
GAGRRRRKRS RASGSAAGSE DGEDSASGSE GEGEDGEGSG SGSEEEEEED ESDSDASLAS
EDLEGEIEDV EVSEGARRAV VSRSRSRAAS DAPSGSGAIP DRYRMGDDDE EVVILQGKRR
RAAVDYRKLA TEMFGQAEGL DDEEAGGEGG EDEVWSPRLQ QRKRRGRRRK GGSDSEGEEE
EEDSDKSGGE EEEQEEEQEG SGKSGGEDEG EEATGQQQQQ QQQQQQQQQQ QQAGGEGTAE
PPAAAEAAAP AAAAPAVPAA PAEPEAAAAA DGAAA
//
