ID A0A2P8D2V6_9BACT Unreviewed; 247 AA.
AC A0A2P8D2V6;
DT 23-MAY-2018, integrated into UniProtKB/TrEMBL.
DT 23-MAY-2018, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE SubName: Full=23S rRNA pseudouridine2604 synthase {ECO:0000313|EMBL:PSK91509.1};
GN ORFNames=B0I18_10592 {ECO:0000313|EMBL:PSK91509.1};
OS Taibaiella chishuiensis.
OC Bacteria; Bacteroidota; Chitinophagia; Chitinophagales; Chitinophagaceae;
OC Taibaiella.
OX NCBI_TaxID=1434707 {ECO:0000313|EMBL:PSK91509.1, ECO:0000313|Proteomes:UP000240572};
RN [1] {ECO:0000313|EMBL:PSK91509.1, ECO:0000313|Proteomes:UP000240572}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CGMCC 1.12700 {ECO:0000313|EMBL:PSK91509.1,
RC ECO:0000313|Proteomes:UP000240572};
RA Whitman W.;
RT "Genomic Encyclopedia of Type Strains, Phase III (KMG-III): the genomes of
RT soil and plant-associated and newly described type strains.";
RL Submitted (MAR-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PSK91509.1}.
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DR EMBL; PYGD01000005; PSK91509.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2P8D2V6; -.
DR Proteomes; UP000240572; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0120159; F:rRNA pseudouridine synthase activity; IEA:UniProt.
DR GO; GO:0000455; P:enzyme-directed rRNA pseudouridine synthesis; IEA:UniProt.
DR CDD; cd02555; PSSA_1; 1.
DR CDD; cd00165; S4; 1.
DR Gene3D; 3.30.70.1560; Alpha-L RNA-binding motif; 1.
DR Gene3D; 3.30.70.580; Pseudouridine synthase I, catalytic domain, N-terminal subdomain; 1.
DR Gene3D; 3.10.290.10; RNA-binding S4 domain; 1.
DR InterPro; IPR042092; PsdUridine_s_RsuA/RluB/E/F_cat.
DR InterPro; IPR020103; PsdUridine_synth_cat_dom_sf.
DR InterPro; IPR006145; PsdUridine_synth_RsuA/RluA.
DR InterPro; IPR000748; PsdUridine_synth_RsuA/RluB/E/F.
DR InterPro; IPR002942; S4_RNA-bd.
DR InterPro; IPR036986; S4_RNA-bd_sf.
DR InterPro; IPR020094; TruA/RsuA/RluB/E/F_N.
DR NCBIfam; TIGR00093; pseudouridine synthase; 1.
DR PANTHER; PTHR47683; PSEUDOURIDINE SYNTHASE FAMILY PROTEIN-RELATED; 1.
DR PANTHER; PTHR47683:SF2; S4 DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF00849; PseudoU_synth_2; 1.
DR Pfam; PF01479; S4; 1.
DR SMART; SM00363; S4; 1.
DR SUPFAM; SSF55174; Alpha-L RNA-binding motif; 1.
DR SUPFAM; SSF55120; Pseudouridine synthase; 1.
DR PROSITE; PS50889; S4; 1.
PE 4: Predicted;
KW Isomerase {ECO:0000256|ARBA:ARBA00023235};
KW Reference proteome {ECO:0000313|Proteomes:UP000240572};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00182}.
FT DOMAIN 8..63
FT /note="RNA-binding S4"
FT /evidence="ECO:0000259|SMART:SM00363"
SQ SEQUENCE 247 AA; 28193 MW; 24FB13B2724B2B66 CRC64;
MNMEKDSMRL AKRMAHLGFC SRREADDYIL KGWVKVNGEV TREKGMQVTE SDKITLNNQA
QQQQSNRVTI LLHKPVGYVS AQPEKGYKAA VELITAANQW SEDKSNIRFR EQHRYGLAPA
GRLDIDSVGL LVLTQDGRIA KQLIGETSST EKEYLVRVTG RLSDNGLKLL NHGLSLDGQK
LLPARVSWQN EDQLRFILKQ GKKRQIRRMC ELVGLHVVGL KRIRMGKVQL GQLPPGKWRY
LRDNETF
//
