ID A0A2R6QAS4_ACTCC Unreviewed; 349 AA.
AC A0A2R6QAS4;
DT 20-JUN-2018, integrated into UniProtKB/TrEMBL.
DT 20-JUN-2018, sequence version 1.
DT 28-JUN-2023, entry version 20.
DE RecName: Full=5'-nucleotidase {ECO:0000256|ARBA:ARBA00012643};
DE EC=3.1.3.5 {ECO:0000256|ARBA:ARBA00012643};
GN ORFNames=CEY00_Acc20859 {ECO:0000313|EMBL:PSS04997.1};
OS Actinidia chinensis var. chinensis (Chinese soft-hair kiwi).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; Ericales; Actinidiaceae; Actinidia.
OX NCBI_TaxID=1590841 {ECO:0000313|EMBL:PSS04997.1, ECO:0000313|Proteomes:UP000241394};
RN [1] {ECO:0000313|EMBL:PSS04997.1, ECO:0000313|Proteomes:UP000241394}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Red5 {ECO:0000313|Proteomes:UP000241394};
RC TISSUE=Young leaf {ECO:0000313|EMBL:PSS04997.1};
RA Pilkington S., Crowhurst R., Hilario E., Nardozza S., Fraser L., Peng Y.,
RA Gunaseelan K., Simpson R., Tahir J., Deroles S., Templeton K., Luo Z.,
RA Davy M., Cheng C., Mcneilage M., Scaglione D., Liu Y., Zhang Q., Datson P.,
RA De Silva N., Gardiner S., Bassett H., Chagne D., Mccallum J., Dzierzon H.,
RA Deng C., Wang Y.-Y., Barron N., Manako K., Bowen J., Foster T., Erridge Z.,
RA Tiffin H., Waite C., Davies K., Grierson E., Laing W., Kirk R., Chen X.,
RA Wood M., Montefiori M., Brummell D., Schwinn K., Catanach A., Fullerton C.,
RA Li D., Meiyalaghan S., Nieuwenhuizen N., Read N., Prakash R., Hunter D.,
RA Zhang H., Mckenzie M., Knabel M., Harris A., Allan A., Chen A., Janssen B.,
RA Plunkett B., Dwamena C., Voogd C., Leif D., Lafferty D., Souleyre E.,
RA Varkonyi-Gasic E., Gambi F., Hanley J., Yao J.-L., Cheung J., David K.,
RA Warren B., Marsh K., Snowden K., Lin-Wang K., Brian L.,
RA Martinez-Sanchez M., Wang M., Ileperuma N., Macnee N., Campin R.,
RA Mcatee P., Drummond R., Espley R., Ireland H., Wu R., Atkinson R.,
RA Karunairetnam S., Bulley S., Chunkath S., Hanley Z., Storey R.,
RA Thrimawithana A., Thomson S., David C., Testolin R.;
RT "An improved, manually edited Actinidia chinensis var. chinensis
RT (kiwifruit) genome highlights the challenges associated with draft genomes
RT and gene prediction in plants.";
RL Submitted (JUL-2017) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000241394}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Red5 {ECO:0000313|Proteomes:UP000241394};
RX PubMed=29661190; DOI=10.1186/s12864-018-4656-3;
RA Pilkington S.M., Crowhurst R., Hilario E., Nardozza S., Fraser L., Peng Y.,
RA Gunaseelan K., Simpson R., Tahir J., Deroles S.C., Templeton K., Luo Z.,
RA Davy M., Cheng C., McNeilage M., Scaglione D., Liu Y., Zhang Q., Datson P.,
RA De Silva N., Gardiner S.E., Bassett H., Chagne D., McCallum J.,
RA Dzierzon H., Deng C., Wang Y.Y., Barron L., Manako K., Bowen J.,
RA Foster T.M., Erridge Z.A., Tiffin H., Waite C.N., Davies K.M.,
RA Grierson E.P., Laing W.A., Kirk R., Chen X., Wood M., Montefiori M.,
RA Brummell D.A., Schwinn K.E., Catanach A., Fullerton C., Li D.,
RA Meiyalaghan S., Nieuwenhuizen N., Read N., Prakash R., Hunter D., Zhang H.,
RA McKenzie M., Knabel M., Harris A., Allan A.C., Gleave A., Chen A.,
RA Janssen B.J., Plunkett B., Ampomah-Dwamena C., Voogd C., Leif D.,
RA Lafferty D., Souleyre E.J.F., Varkonyi-Gasic E., Gambi F., Hanley J.,
RA Yao J.L., Cheung J., David K.M., Warren B., Marsh K., Snowden K.C.,
RA Lin-Wang K., Brian L., Martinez-Sanchez M., Wang M., Ileperuma N.,
RA Macnee N., Campin R., McAtee P., Drummond R.S.M., Espley R.V.,
RA Ireland H.S., Wu R., Atkinson R.G., Karunairetnam S., Bulley S.,
RA Chunkath S., Hanley Z., Storey R., Thrimawithana A.H., Thomson S.,
RA David C., Testolin R., Huang H., Hellens R.P., Schaffer R.J.;
RT "A manually annotated Actinidia chinensis var. chinensis (kiwifruit) genome
RT highlights the challenges associated with draft genomes and gene prediction
RT in plants.";
RL BMC Genomics 19:257-257(2018).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a ribonucleoside 5'-phosphate + H2O = a ribonucleoside +
CC phosphate; Xref=Rhea:RHEA:12484, ChEBI:CHEBI:15377,
CC ChEBI:CHEBI:18254, ChEBI:CHEBI:43474, ChEBI:CHEBI:58043; EC=3.1.3.5;
CC Evidence={ECO:0000256|ARBA:ARBA00000815};
CC -!- SIMILARITY: Belongs to the pyrimidine 5'-nucleotidase family.
CC {ECO:0000256|ARBA:ARBA00008389}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PSS04997.1}.
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DR EMBL; NKQK01000018; PSS04997.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2R6QAS4; -.
DR STRING; 1590841.A0A2R6QAS4; -.
DR EnsemblPlants; PSS04997; PSS04997; CEY00_Acc20859.
DR Gramene; PSS04997; PSS04997; CEY00_Acc20859.
DR InParanoid; A0A2R6QAS4; -.
DR OMA; GPERMQI; -.
DR Proteomes; UP000241394; Chromosome lg18.
DR GO; GO:0005737; C:cytoplasm; IEA:InterPro.
DR GO; GO:0000287; F:magnesium ion binding; IEA:InterPro.
DR GO; GO:0106411; F:XMP 5'-nucleosidase activity; IEA:UniProtKB-EC.
DR GO; GO:0009117; P:nucleotide metabolic process; IEA:UniProtKB-KW.
DR Gene3D; 3.40.50.1000; HAD superfamily/HAD-like; 1.
DR Gene3D; 1.10.150.340; Pyrimidine 5'-nucleotidase (UMPH-1), N-terminal domain; 1.
DR InterPro; IPR036412; HAD-like_sf.
DR InterPro; IPR023214; HAD_sf.
DR InterPro; IPR006434; Pyrimidine_nucleotidase_eu.
DR PANTHER; PTHR13045; 5'-NUCLEOTIDASE; 1.
DR PANTHER; PTHR13045:SF0; 7-METHYLGUANOSINE PHOSPHATE-SPECIFIC 5'-NUCLEOTIDASE; 1.
DR Pfam; PF05822; UMPH-1; 1.
DR SFLD; SFLDG01128; C1.4:_5'-Nucleotidase_Like; 1.
DR SFLD; SFLDS00003; Haloacid_Dehalogenase; 1.
DR SUPFAM; SSF56784; HAD-like; 1.
PE 3: Inferred from homology;
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleotide metabolism {ECO:0000256|ARBA:ARBA00023080};
KW Reference proteome {ECO:0000313|Proteomes:UP000241394}.
SQ SEQUENCE 349 AA; 39427 MW; 194AE166F1AD242B CRC64;
MSLRLYNTIP VRWSTICDHR RIPTHINPRV WCCSYRNRNQ IEMEQIGVEA SNDTSEVVVG
DKEMLEKKIA AIRLAGPAKL QVIADFDATL TKYWLDGSRG QSSHSLLKQE NPEYDVKRRK
LYEYYHPLEF NPIIPLDEKA KLMEEWWEKT HALLIEGGVT YDAIKTSVGN AIIAFREGVV
ELFEFLEERE VPVLIFSAGL ADIIEEVLRQ KLHRSFKNVK IVSNRMLFNQ SGQLVSFKGK
TIHVLNKNEH ALDMAAPVHD QLGDTNGPID DNASVKKRNN VLLLGDHIGD LGMSDGLNYE
TRISVGFLNH NVADSLDSYR KAFDVVYLND APMSGVVKLV SQLCSTGSG
//