ID A0A2S8WUR2_9MICC Unreviewed; 436 AA.
AC A0A2S8WUR2;
DT 18-JUL-2018, integrated into UniProtKB/TrEMBL.
DT 18-JUL-2018, sequence version 1.
DT 24-JAN-2024, entry version 17.
DE SubName: Full=Ribonuclease D {ECO:0000313|EMBL:PQZ95801.1};
GN ORFNames=CQ018_00405 {ECO:0000313|EMBL:PQZ95801.1};
OS Arthrobacter sp. MYb227.
OC Bacteria; Actinomycetota; Actinomycetes; Micrococcales; Micrococcaceae;
OC Arthrobacter.
OX NCBI_TaxID=1848601 {ECO:0000313|EMBL:PQZ95801.1, ECO:0000313|Proteomes:UP000239972};
RN [1] {ECO:0000313|EMBL:PQZ95801.1, ECO:0000313|Proteomes:UP000239972}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MYb227 {ECO:0000313|EMBL:PQZ95801.1,
RC ECO:0000313|Proteomes:UP000239972};
RA Zimmermann J., Obeng N., Yang W., Obeng O., Kissoyan K., Pees B.,
RA Dirksen P., Hoppner M., Franke A., Rosenstiel P., Leippe M., Dierking K.,
RA Kaleta C., Schulenburg H.;
RT "Genomic, metabolic, and phenotypic characteristics of bacterial isolates
RT from the natural microbiome of the model nematode Caenorhabditis elegans.";
RL Submitted (SEP-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PQZ95801.1}.
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DR EMBL; PCPT01000001; PQZ95801.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2S8WUR2; -.
DR OrthoDB; 144122at2; -.
DR Proteomes; UP000239972; Unassembled WGS sequence.
DR GO; GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0000166; F:nucleotide binding; IEA:InterPro.
DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR CDD; cd06142; RNaseD_exo; 1.
DR Gene3D; 1.10.150.80; HRDC domain; 2.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR002562; 3'-5'_exonuclease_dom.
DR InterPro; IPR041605; Exo_C.
DR InterPro; IPR010997; HRDC-like_sf.
DR InterPro; IPR002121; HRDC_dom.
DR InterPro; IPR044876; HRDC_dom_sf.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR PANTHER; PTHR47649; RIBONUCLEASE D; 1.
DR PANTHER; PTHR47649:SF1; RIBONUCLEASE D; 1.
DR Pfam; PF01612; DNA_pol_A_exo1; 1.
DR Pfam; PF18305; DNA_pol_A_exoN; 1.
DR Pfam; PF00570; HRDC; 1.
DR SMART; SM00474; 35EXOc; 1.
DR SMART; SM00341; HRDC; 1.
DR SUPFAM; SSF47819; HRDC-like; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50967; HRDC; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000239972}.
FT DOMAIN 253..333
FT /note="HRDC"
FT /evidence="ECO:0000259|PROSITE:PS50967"
FT REGION 1..22
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 436 AA; 47496 MW; 3B0E6472CE7FF188 CRC64;
MTRTEHAQRS GAPDPVLSNT SDATVADGTV AQEVAEPVLL DMPRDGVPEV IATLPALKRA
ARAIAAGTGP VSVDAERASG FRYGQRAFLV QIRREGSGTW LIDPVPFENL DEIQEAIGDE
IWILHAASQD LPCLAELGMA PSVLFDTELA ARIAGLPRVG LGPAVESLLG LKLAKEHSAA
DWSTRPLPEP WLRYAALDVE VLDVLRLELI KILEADQKIE IAEQEFEAVR TAPPAPPRVD
PWRRTSGLHQ IRERRTLAAV KNLWEAREAL AKSRDVAPGR LIPDSALIAA AKAMPTSVPA
LLKTKGFHGR SASKDAPRWL KALQDARFAK ELPPNQVPSN APPPPRVWAD KDPLAAARLQ
TARARISRIS ESMNIPLENL LTPDYLRRIC WRPPSEIDPD SVAQALAELG ARQWQIDALA
PVITVALLDP DELEGR
//