ID A0A2S9BV84_9MICO Unreviewed; 1508 AA.
AC A0A2S9BV84;
DT 18-JUL-2018, integrated into UniProtKB/TrEMBL.
DT 18-JUL-2018, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE RecName: Full=F5/8 type C domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=CQ034_05890 {ECO:0000313|EMBL:PRB65617.1};
OS Microbacterium sp. MYb45.
OC Bacteria; Actinomycetota; Actinomycetes; Micrococcales; Microbacteriaceae;
OC Microbacterium.
OX NCBI_TaxID=1827294 {ECO:0000313|EMBL:PRB65617.1, ECO:0000313|Proteomes:UP000238044};
RN [1] {ECO:0000313|EMBL:PRB65617.1, ECO:0000313|Proteomes:UP000238044}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MYb45 {ECO:0000313|EMBL:PRB65617.1,
RC ECO:0000313|Proteomes:UP000238044};
RA Zimmermann J., Obeng N., Yang W., Obeng O., Kissoyan K., Pees B.,
RA Dirksen P., Hoppner M., Franke A., Rosenstiel P., Leippe M., Dierking K.,
RA Kaleta C., Schulenburg H.;
RT "Genomic, metabolic, and phenotypic characteristics of bacterial isolates
RT from the natural microbiome of the model nematode Caenorhabditis elegans.";
RL Submitted (SEP-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the polysaccharide lyase 8 family.
CC {ECO:0000256|ARBA:ARBA00006699}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PRB65617.1}.
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DR EMBL; PCPG01000001; PRB65617.1; -; Genomic_DNA.
DR OrthoDB; 5480482at2; -.
DR Proteomes; UP000238044; Unassembled WGS sequence.
DR GO; GO:0005576; C:extracellular region; IEA:InterPro.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0030246; F:carbohydrate binding; IEA:InterPro.
DR GO; GO:0016798; F:hydrolase activity, acting on glycosyl bonds; IEA:UniProtKB-KW.
DR GO; GO:0016829; F:lyase activity; IEA:InterPro.
DR GO; GO:0000272; P:polysaccharide catabolic process; IEA:UniProtKB-KW.
DR CDD; cd00063; FN3; 1.
DR Gene3D; 2.70.98.10; -; 1.
DR Gene3D; 1.50.10.100; Chondroitin AC/alginate lyase; 1.
DR Gene3D; 1.20.1270.70; Designed single chain three-helix bundle; 1.
DR Gene3D; 2.60.120.260; Galactose-binding domain-like; 3.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR Gene3D; 2.60.220.10; Polysaccharide lyase family 8-like, C-terminal; 1.
DR InterPro; IPR008929; Chondroitin_lyas.
DR InterPro; IPR000421; FA58C.
DR InterPro; IPR003961; FN3_dom.
DR InterPro; IPR036116; FN3_sf.
DR InterPro; IPR011013; Gal_mutarotase_sf_dom.
DR InterPro; IPR008979; Galactose-bd-like_sf.
DR InterPro; IPR014718; GH-type_carb-bd.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR038970; Lyase_8.
DR InterPro; IPR011071; Lyase_8-like_C.
DR InterPro; IPR012970; Lyase_8_alpha_N.
DR InterPro; IPR004103; Lyase_8_C.
DR InterPro; IPR003159; Lyase_8_central_dom.
DR PANTHER; PTHR38481; HYALURONATE LYASE; 1.
DR PANTHER; PTHR38481:SF1; HYALURONATE LYASE; 1.
DR Pfam; PF00754; F5_F8_type_C; 3.
DR Pfam; PF02278; Lyase_8; 1.
DR Pfam; PF02884; Lyase_8_C; 1.
DR Pfam; PF08124; Lyase_8_N; 1.
DR SMART; SM00060; FN3; 1.
DR SUPFAM; SSF48230; Chondroitin AC/alginate lyase; 1.
DR SUPFAM; SSF49265; Fibronectin type III; 1.
DR SUPFAM; SSF74650; Galactose mutarotase-like; 1.
DR SUPFAM; SSF49785; Galactose-binding domain-like; 3.
DR SUPFAM; SSF49863; Hyaluronate lyase-like, C-terminal domain; 1.
DR PROSITE; PS50022; FA58C_3; 3.
DR PROSITE; PS50853; FN3; 1.
PE 3: Inferred from homology;
KW Carbohydrate metabolism {ECO:0000256|ARBA:ARBA00023277};
KW Glycosidase {ECO:0000256|ARBA:ARBA00023295};
KW Hydrolase {ECO:0000256|ARBA:ARBA00023295};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Polysaccharide degradation {ECO:0000256|ARBA:ARBA00023326};
KW Signal {ECO:0000256|SAM:SignalP}; Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT SIGNAL 1..28
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 29..1508
FT /note="F5/8 type C domain-containing protein"
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5015478614"
FT TRANSMEM 1481..1500
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 709..824
FT /note="F5/8 type C"
FT /evidence="ECO:0000259|PROSITE:PS50022"
FT DOMAIN 829..973
FT /note="F5/8 type C"
FT /evidence="ECO:0000259|PROSITE:PS50022"
FT DOMAIN 977..1117
FT /note="F5/8 type C"
FT /evidence="ECO:0000259|PROSITE:PS50022"
FT DOMAIN 1275..1363
FT /note="Fibronectin type-III"
FT /evidence="ECO:0000259|PROSITE:PS50853"
FT REGION 437..462
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 725..754
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1508 AA; 158534 MW; 80F19F12B558E088 CRC64;
MRRITAFIAF TVALVIGSSA LTTVPASAAP EDDVATVIDR LEEYYLGQGD DIIIANGIYL
AKTSEALDYV ASQQEDGSWA DVNYADRTSS ANGSVWSAYT ALYRMLAMTQ AYKDPKAAGH
GDKRLVDAVQ RALLHWDRVN PGNTNWWETE IGESIAMGRI SMFLGSELSE DAFRVSLAHN
TGKLDPVGAN GSWRTSNYIF EALSTGDIAK VKEGFATIVA TIAVDHSGTV KEAVQPDASF
WAHGAQLYSE GYGMVLFTYA ALWSDVARGT GLAFTRAQLD SIAFYFIEGT RWLIRGEIGM
LYLNYRPPKT VSDITSHASE FIEPLQRMVR TDALYSTAYQ AVLDGVLGKT ETNGVTGAKY
FWRSEFASHQ RDDYGIFTRL NSSRTFGAEL RTSYRDDLGN PVFWNAMGST AIQVNNREYL
DLGPTFDWWH YPGVTAPDEK RTERGFENRG RNGDGASFTG GTSDGEFGAS VLTLDAAGTG
ARKSYFTFDE GMVALGAGIA STSGAAVHTT INQASAKENA TVGGKPVAGD ADDQSVGGAR
WAYNDEVGYV FADGQDVRVS NRAQSGSWEG QEAVSRDAFT LYVDHGTKPT AGTYDYTVLP
AATPAEVAAF ADAPAMRTLR NDTSVQAVRH DAAGITMATF YAAGTLDLGG GRALTVDQPS
IVLLDERGET PVVSLSNPDR PGLSVGVSLT GGGQDQHARF ALGSGENMGR TVTSALAAGP
LPATSAFSAS STADGSSAAA LGDDDRDTAW RSAGDGTQWA AVTLPRGSWV TKATIDWTDA
PAGDFVVQTS QNGVDWTDRA HVTDGDGGVD EIPLDPTPAE HVRVLLLDGE GEGYGIRELS
VASSVNLSID GATRASGYAG YNLVHALADG DPSTRWRGNN ANSAWAQVDL GESKPVSTVR
LSWEAAYAKA YRIQLSDDGR NWRDAYVTPS AGSDGGVDVI TLNDQSARFV RMQTVTRALD
YGPSLWEFEI FSDRLVAEAP AVPVGNANLA LGRPTTADSV HQNNATITGP KATDGSRSTK
WSSARAAAEH WLQVDLESVR SVSRAVVAWE AGTSNDYRIE GSVDGTTWMP LARVQAAQPT
LIHQHDFAAT DVRYVRLSGM PATQYGLNIW ELELYGGYTF ECAGPVSAGR DGAAVVAATV
SPVNPADTFT AVVMDDSVAT VKGDARVSAD GRVEVDLATR EPGRTTVGIR HQGGSEIAWC
TVTVIADTGR LQAQVDAANT LDSTAYTSAS WKPLLPALEA GKDVLAAPGS AQGQVDAAAD
ALAAALAGLI RLDAAPSAPR DVVATASGDR VNVQWTVPEN VGGSPIIAYE VAVGDRVVQA
EGAVLTAAVT GLAAGEYAVT VRAQNAGGWS VPSAAIVVVV DPEVVTPSVT VEGSPKVGGR
IDVSGVGFQP GIEYTVQLRS TPADLGTVTA ETDGSFAFRG VVPEDVEAGA HTLVVMHDGA
DIASTPVRII AAAGPGAPGG PGDGGTDGSG ALPATGGDLA WLPWTLAMAL LLLLSGAVAM
KARRQPRD
//
