ID A0A2T0T887_9BACT Unreviewed; 317 AA.
AC A0A2T0T887;
DT 18-JUL-2018, integrated into UniProtKB/TrEMBL.
DT 18-JUL-2018, sequence version 1.
DT 24-JAN-2024, entry version 15.
DE SubName: Full=Putative DNA-binding transcriptional regulator YafY {ECO:0000313|EMBL:PRY41874.1};
GN ORFNames=CLV58_10574 {ECO:0000313|EMBL:PRY41874.1};
OS Spirosoma oryzae.
OC Bacteria; Bacteroidota; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.
OX NCBI_TaxID=1469603 {ECO:0000313|EMBL:PRY41874.1, ECO:0000313|Proteomes:UP000238375};
RN [1] {ECO:0000313|EMBL:PRY41874.1, ECO:0000313|Proteomes:UP000238375}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 28354 {ECO:0000313|EMBL:PRY41874.1,
RC ECO:0000313|Proteomes:UP000238375};
RA Goeker M.;
RT "Genomic Encyclopedia of Archaeal and Bacterial Type Strains, Phase II
RT (KMG-II): from individual species to whole genera.";
RL Submitted (MAR-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PRY41874.1}.
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DR EMBL; PVTE01000005; PRY41874.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2T0T887; -.
DR OrthoDB; 9815009at2; -.
DR Proteomes; UP000238375; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR001034; DeoR_HTH.
DR InterPro; IPR013196; HTH_11.
DR InterPro; IPR028349; PafC.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR InterPro; IPR026881; WYL_dom.
DR PANTHER; PTHR34580; -; 1.
DR PANTHER; PTHR34580:SF3; REGULATORY PROTEIN-RELATED; 1.
DR Pfam; PF08279; HTH_11; 1.
DR Pfam; PF13280; WYL; 1.
DR PIRSF; PIRSF016838; PafC; 2.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS51000; HTH_DEOR_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000313|EMBL:PRY41874.1};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 3..58
FT /note="HTH deoR-type"
FT /evidence="ECO:0000259|PROSITE:PS51000"
SQ SEQUENCE 317 AA; 36825 MW; 557D1801D817DFF7 CRC64;
MNRIDRLTAI LIHLQTKRVV KAQELADRFD LSLRTIYRDI RALEEAGVPI GAEAGIGYFL
TDYHLPPVMF TNAEASALQV GGKLLAQMAD ESLRTPYESA LYKIKAVLSR SEKDHLDELA
GQIEILNPTR PQPYSDQLLY AIQGALVRGH RLTIVYRAGY NDSQTQRTIE PIGLCHYGIG
WHLIAYCRLR DDYRDFRVDR IQQLAELSEP FPRQSRLTLQ GYLDRLKQEQ DLQEVVITFS
RKMARFTHDE RYSFGFISQE ETLDGVRMTF LTQCLKTLGR WLLMYGNSIR VEHPTELNEI
MRHYIQEMVE HYELPMV
//
