ID A0A2T0T888_9BACT Unreviewed; 382 AA.
AC A0A2T0T888;
DT 18-JUL-2018, integrated into UniProtKB/TrEMBL.
DT 18-JUL-2018, sequence version 1.
DT 27-MAR-2024, entry version 16.
DE SubName: Full=Putative transposase {ECO:0000313|EMBL:PRY41876.1};
GN ORFNames=CLV58_10576 {ECO:0000313|EMBL:PRY41876.1};
OS Spirosoma oryzae.
OC Bacteria; Bacteroidota; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.
OX NCBI_TaxID=1469603 {ECO:0000313|EMBL:PRY41876.1, ECO:0000313|Proteomes:UP000238375};
RN [1] {ECO:0000313|EMBL:PRY41876.1, ECO:0000313|Proteomes:UP000238375}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 28354 {ECO:0000313|EMBL:PRY41876.1,
RC ECO:0000313|Proteomes:UP000238375};
RA Goeker M.;
RT "Genomic Encyclopedia of Archaeal and Bacterial Type Strains, Phase II
RT (KMG-II): from individual species to whole genera.";
RL Submitted (MAR-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: In the C-terminal section; belongs to the transposase 35
CC family. {ECO:0000256|ARBA:ARBA00008761}.
CC -!- SIMILARITY: In the N-terminal section; belongs to the transposase 2
CC family. {ECO:0000256|ARBA:ARBA00011044}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PRY41876.1}.
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DR EMBL; PVTE01000005; PRY41876.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2T0T888; -.
DR OrthoDB; 1551477at2; -.
DR Proteomes; UP000238375; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR GO; GO:0032196; P:transposition; IEA:UniProtKB-KW.
DR InterPro; IPR010095; Cas12f1-like_TNB.
DR InterPro; IPR001959; Transposase.
DR InterPro; IPR021027; Transposase_put_HTH.
DR NCBIfam; NF040570; guided_TnpB; 1.
DR NCBIfam; TIGR01766; IS200/IS605 family accessory protein TnpB-like domain; 1.
DR PANTHER; PTHR30405:SF20; RNA-GUIDED DNA ENDONUCLEASE INSQ-RELATED; 1.
DR PANTHER; PTHR30405; TRANSPOSASE; 1.
DR Pfam; PF12323; HTH_OrfB_IS605; 1.
DR Pfam; PF01385; OrfB_IS605; 1.
DR Pfam; PF07282; OrfB_Zn_ribbon; 1.
PE 3: Inferred from homology;
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Endonuclease {ECO:0000256|ARBA:ARBA00022759};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Transposition {ECO:0000256|ARBA:ARBA00022578};
KW Zinc {ECO:0000256|ARBA:ARBA00022833}.
FT DOMAIN 1..43
FT /note="Transposase putative helix-turn-helix"
FT /evidence="ECO:0000259|Pfam:PF12323"
FT DOMAIN 170..282
FT /note="Probable transposase IS891/IS1136/IS1341"
FT /evidence="ECO:0000259|Pfam:PF01385"
FT DOMAIN 293..361
FT /note="Cas12f1-like TNB"
FT /evidence="ECO:0000259|Pfam:PF07282"
SQ SEQUENCE 382 AA; 43518 MW; 964677A964A42D71 CRC64;
MIKAYKYELA PTPEQANHLN RIMGSCRFVY NLALDTKIHA YTKGVSVNCF ELMKQLTDLK
AEYDWLYESP THALQHAISN LDNAFTNFFK GRAKFPRFKS KKHKQSFHIP QGVKVDWEKG
SVFLPKLKWV KLIVSRQFVG SIRNATVSKT PTGKFLVSVL VETGADVPAK RPMSHETAVG
VDVGLKTFAT LSDGTSIANP KLLFHSLKRL RVEQRTLKRR SKKGAKAQSK GYHKQRLVVA
KLHEKVSNQR KDFLHKASTA IVKEYDTIVL EDLNVAGMVK NRHLSRAISD VGWGMFEGFI
RYKCEWHGKH FEQIGRFEPS SKICSTCGHQ KGELSLTERE WTCIKCETKH DRDQNAAINI
RNFGLSKTFR LGTQPLRVKT GQ
//
