ID A0A2T3AUS7_AMORE Unreviewed; 1751 AA.
AC A0A2T3AUS7;
DT 18-JUL-2018, integrated into UniProtKB/TrEMBL.
DT 18-JUL-2018, sequence version 1.
DT 27-MAR-2024, entry version 22.
DE RecName: Full=DNA polymerase {ECO:0000256|RuleBase:RU000442};
DE EC=2.7.7.7 {ECO:0000256|RuleBase:RU000442};
GN ORFNames=M430DRAFT_52710 {ECO:0000313|EMBL:PSS12408.1};
OS Amorphotheca resinae ATCC 22711.
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes;
OC Helotiales; Amorphothecaceae; Amorphotheca.
OX NCBI_TaxID=857342 {ECO:0000313|EMBL:PSS12408.1, ECO:0000313|Proteomes:UP000241818};
RN [1] {ECO:0000313|EMBL:PSS12408.1, ECO:0000313|Proteomes:UP000241818}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 22711 {ECO:0000313|EMBL:PSS12408.1,
RC ECO:0000313|Proteomes:UP000241818};
RX PubMed=29315638; DOI=10.1111/nph.14974;
RA Martino E., Morin E., Grelet G.A., Kuo A., Kohler A., Daghino S.,
RA Barry K.W., Cichocki N., Clum A., Dockter R.B., Hainaut M., Kuo R.C.,
RA LaButti K., Lindahl B.D., Lindquist E.A., Lipzen A., Khouja H.R.,
RA Magnuson J., Murat C., Ohm R.A., Singer S.W., Spatafora J.W., Wang M.,
RA Veneault-Fourrey C., Henrissat B., Grigoriev I.V., Martin F.M., Perotto S.;
RT "Comparative genomics and transcriptomics depict ericoid mycorrhizal fungi
RT as versatile saprotrophs and plant mutualists.";
RL New Phytol. 217:1213-1229(2018).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a 2'-deoxyribonucleoside 5'-triphosphate + DNA(n) =
CC diphosphate + DNA(n+1); Xref=Rhea:RHEA:22508, Rhea:RHEA-COMP:17339,
CC Rhea:RHEA-COMP:17340, ChEBI:CHEBI:33019, ChEBI:CHEBI:61560,
CC ChEBI:CHEBI:173112; EC=2.7.7.7;
CC Evidence={ECO:0000256|RuleBase:RU000442};
CC -!- COFACTOR:
CC Name=[4Fe-4S] cluster; Xref=ChEBI:CHEBI:49883;
CC Evidence={ECO:0000256|ARBA:ARBA00001966,
CC ECO:0000256|RuleBase:RU000442};
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|RuleBase:RU000442}.
CC -!- SIMILARITY: Belongs to the DNA polymerase type-B family.
CC {ECO:0000256|ARBA:ARBA00005755, ECO:0000256|RuleBase:RU000442}.
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DR EMBL; KZ679015; PSS12408.1; -; Genomic_DNA.
DR STRING; 857342.A0A2T3AUS7; -.
DR InParanoid; A0A2T3AUS7; -.
DR OrthoDB; 211439at2759; -.
DR Proteomes; UP000241818; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0016035; C:zeta DNA polymerase complex; IEA:InterPro.
DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0000166; F:nucleotide binding; IEA:InterPro.
DR GO; GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
DR GO; GO:0019985; P:translesion synthesis; IEA:InterPro.
DR CDD; cd05778; DNA_polB_zeta_exo; 1.
DR CDD; cd05534; POLBc_zeta; 1.
DR Gene3D; 1.10.132.60; DNA polymerase family B, C-terminal domain; 1.
DR Gene3D; 3.30.342.10; DNA Polymerase, chain B, domain 1; 1.
DR Gene3D; 1.10.287.690; Helix hairpin bin; 1.
DR Gene3D; 3.90.1600.10; Palm domain of DNA polymerase; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR006172; DNA-dir_DNA_pol_B.
DR InterPro; IPR017964; DNA-dir_DNA_pol_B_CS.
DR InterPro; IPR006133; DNA-dir_DNA_pol_B_exonuc.
DR InterPro; IPR006134; DNA-dir_DNA_pol_B_multi_dom.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR042087; DNA_pol_B_thumb.
DR InterPro; IPR023211; DNA_pol_palm_dom_sf.
DR InterPro; IPR030559; PolZ_Rev3.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR025687; Znf-C4pol.
DR PANTHER; PTHR45812; DNA POLYMERASE ZETA CATALYTIC SUBUNIT; 1.
DR PANTHER; PTHR45812:SF1; DNA POLYMERASE ZETA CATALYTIC SUBUNIT; 1.
DR Pfam; PF00136; DNA_pol_B; 1.
DR Pfam; PF03104; DNA_pol_B_exo1; 1.
DR Pfam; PF14260; zf-C4pol; 1.
DR PRINTS; PR00106; DNAPOLB.
DR SMART; SM00486; POLBc; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS00116; DNA_POLYMERASE_B; 1.
PE 3: Inferred from homology;
KW 4Fe-4S {ECO:0000256|RuleBase:RU000442};
KW DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW DNA replication {ECO:0000256|RuleBase:RU000442};
KW DNA-binding {ECO:0000256|RuleBase:RU000442};
KW DNA-directed DNA polymerase {ECO:0000256|ARBA:ARBA00022932,
KW ECO:0000256|RuleBase:RU000442};
KW Iron {ECO:0000256|ARBA:ARBA00023004, ECO:0000256|RuleBase:RU000442};
KW Iron-sulfur {ECO:0000256|ARBA:ARBA00023014, ECO:0000256|RuleBase:RU000442};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723,
KW ECO:0000256|RuleBase:RU000442};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695,
KW ECO:0000256|RuleBase:RU000442}; Nucleus {ECO:0000256|RuleBase:RU000442};
KW Reference proteome {ECO:0000313|Proteomes:UP000241818};
KW Transferase {ECO:0000256|ARBA:ARBA00022679, ECO:0000256|RuleBase:RU000442};
KW Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|RuleBase:RU000442};
KW Zinc-finger {ECO:0000256|RuleBase:RU000442}.
FT DOMAIN 886..1083
FT /note="DNA-directed DNA polymerase family B exonuclease"
FT /evidence="ECO:0000259|Pfam:PF03104"
FT DOMAIN 1150..1596
FT /note="DNA-directed DNA polymerase family B
FT multifunctional"
FT /evidence="ECO:0000259|Pfam:PF00136"
FT DOMAIN 1647..1718
FT /note="C4-type zinc-finger of DNA polymerase delta"
FT /evidence="ECO:0000259|Pfam:PF14260"
FT REGION 418..440
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 497..567
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 592..640
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 497..523
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 526..543
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 544..563
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 607..628
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1751 AA; 199365 MW; 86584F3E2379AC08 CRC64;
MDLFRVRLNC IDSYQASPTK FDPVLRNNVK PSQAHKEPKV PIIRVFGATE TGQKVCAHIH
GAFPYLYIEY TGSLVPDEVG AYIHRLHLSI DHALAVSYRR NIHDVNAKFV ARITLVKGIP
FYGFHVGYRY YLKIYMLDPM VMTRLADLLR QGVVMKKVFQ PFEAHLQYLL QWMADYNLYG
CGYIDCSVVT FRSPVPKYEE LVNMSHLWHD RSIPGELVTE DAELPRVSHC SIEVDICVQD
IINRHDIKPR PLHHDFIERL NPLGPDEKLV HSMAGLWRDE ARRRRSRVSD PEPGSSLFPA
EAMISMSADS RSSRSDGWVH EEEYREKVMD LIADEKGKSD GAKISFTTFV QHSPFEATVR
TSLESVEDLF PENLRQALEL VPKTSIRSIH YDLNDQEIGD VDEKGILAFD LSGHDGGAYD
SDDESMRGME FSQRKQGDHV EETHLDPADI IQEEHEVDNE SHRDGAQFEE QSLNLSDPDT
LNSLTKSSAM DLTTEDAAIE PSPSNSLDSS YVSVCSGPQE NPPDHLSVQA HRKSPEKNLK
RPESPVKQSN SVNKRQRVSL GQTRRPDISL VDPERTVDSD YVNHRNMRKV SLAETASLHE
DSKLGQMMRS RPNTDNVSLL ATGPRRESSS QDRLYERPQM QPLRFPVVKD PHDPNTILRI
SQKSASQLSS PERKYSVTYN PSKASEFPSS DISLRSVGIC TPRSNILVHM RNRIEKQDNS
VILLALDELP PSSVSVISTM QNFSLPEVIY QDAFYSNERD VPERAREWAG REFKLESLTV
PFLPEFDPTG SSEATFGDKT AIVLDKPKVE KVHESRRRAC GLRSWEMANS PPAYAEVHSW
FRSEEAARLA NATTSHVPLR VVAGSQGKGK LSQVEGPTQK NKHGFKYTQN QATCSVQHEA
QYMSTMSLEI HINTRGDFVP NPEHDEVQCL FWGLHSDQAE HESNSNTEGI RVGVVVLSGN
NTMAQNIAKQ VGFEIEEESS ELDLMIHMVD IVRSYDPDIL TGYEVHGSSW GYLIERARLK
YDYDLCDEFS RVKVQSHGRF GKDNDKWGFN NTSSIRVTGR HLINIWRAMR SELNLLQYTM
ENVVFHLLHR RIPHFTWADL TRWYTNGRPR DLAKVIKHYI SRVQLDLQIL EQNELIARTS
EQARLLGVDF FSVFSRGSQF KVESLMFRIA KPENFLLVSP SRKQVGGQNA LECLPLVMEP
QSAFYTSPVL VLDFQSLYPS VMIAYNYCYS TFLGRVVDWR GTNKMGFTEF KRQQRLLELL
QDHINIAPNG IMYTKPEIRK SLLAKMLSEI LETRVMVKSG MKLDKDDKTL QRLLNNRQLA
LKLIANVTYG YTSASFSGRM PCSEIADSIV QTGRETLEKA IAFIHSVERW GAEVVYGDTD
SLFVHLKGRT KDQAFDIGEE IAKAVTNMNP RPVKLKFEKV YFPCVLLAKK RYVGFKYESR
DQTKPDFDAK GTETVRRDGI PAEQMIEEKA LKILFRTSDL SQVKSYFQNE CEKIMKGSVS
IQDFCFAREV KLGTYSNKGP PPPGALISTK RMLEDSRAEP QYGERVPYVV ITGAPGARLI
DRCVAPEKLL EDDHCELDAE YYISKRLIPP LERIFNLVGA NIRSWYDEMP KVQRIRRIDT
NIQLQGQSKE LGINKKTLES YLKSSSCVVC KEKVETDGPV CPGCVANRPW SIFSLRTRLS
HAERKFMDLQ KICQSCSGIS PLDEVKCDSK DCPVFYSRTR QKARLKTERA IIEPVMTELT
GSCVDLESLE W
//