ID A0A2T5P6D1_9PSED Unreviewed; 493 AA.
AC A0A2T5P6D1;
DT 18-JUL-2018, integrated into UniProtKB/TrEMBL.
DT 18-JUL-2018, sequence version 1.
DT 27-MAR-2024, entry version 23.
DE SubName: Full=Sigma-54-dependent Fis family transcriptional regulator {ECO:0000313|EMBL:PTU73274.1};
GN ORFNames=DBO85_13085 {ECO:0000313|EMBL:PTU73274.1};
OS Pseudomonas mangrovi.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=2161748 {ECO:0000313|EMBL:PTU73274.1, ECO:0000313|Proteomes:UP000244064};
RN [1] {ECO:0000313|EMBL:PTU73274.1, ECO:0000313|Proteomes:UP000244064}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=TC-11 {ECO:0000313|EMBL:PTU73274.1,
RC ECO:0000313|Proteomes:UP000244064};
RA Chen C.;
RT "Pseudomonas sp. nov., isolated from mangrove soil.";
RL Submitted (APR-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PTU73274.1}.
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DR EMBL; QASN01000020; PTU73274.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2T5P6D1; -.
DR OrthoDB; 9804019at2; -.
DR Proteomes; UP000244064; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 3.40.50.2300; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR011006; CheY-like_superfamily.
DR InterPro; IPR010518; FleQ.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR002197; HTH_Fis.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
DR PANTHER; PTHR32071:SF121; PTS-DEPENDENT DIHYDROXYACETONE KINASE OPERON REGULATORY PROTEIN-RELATED; 1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF06490; FleQ; 1.
DR Pfam; PF02954; HTH_8; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR PRINTS; PR01590; HTHFIS.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF52172; CheY-like; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000244064};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 146..374
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
SQ SEQUENCE 493 AA; 55618 MW; 455130F2BE08315D CRC64;
MWRETKILLI DDDSERRREM AVILNFLGEE HLCCTSTAWQ SEVEKLGAGK SLLCVLLGDV
QAKGGVLELL KLLDKWDELL PVLLLGEGIP AEWGEELRQR VLASLEMPPS YNKLLDSLHR
AQVYREMYDQ ARSRGRHREP NLFRSLVGTS RAIQGVRQMM QQVADTEASV LILGESGTGK
EVVARNLHYN SKRREGPFVP VNCGAIPAEL LESELFGHEK GAFTGAISSR AGRFELAQGG
TLFLDEIGDM PLPMQVKLLR VLQERTFERV GSNKTQSADV RIIAATHKDL EQMIEAGLFR
EDLYYRLNVF PIEMAPLRER VEDIPLLLNE LISRMEHEKR GSIRFNSAAI MSLCQHDWAG
NVRELANLVE RMAIMHPYGV IGVAELPKKF RHVDDEDEQL AISLREDLDE RAMIASNAVV
SSYSSTLLPP EGLDLKDYLG NLEQSLIQQA LDDAGGVVAR AAERLRIRRT TLVEKMRKYG
MSRKDDEDDL SED
//
