ID A0A2T6CML3_9BACT Unreviewed; 536 AA.
AC A0A2T6CML3;
DT 18-JUL-2018, integrated into UniProtKB/TrEMBL.
DT 18-JUL-2018, sequence version 1.
DT 27-MAR-2024, entry version 18.
DE RecName: Full=Sigma-70 family RNA polymerase sigma factor {ECO:0008006|Google:ProtNLM};
GN ORFNames=DB354_16170 {ECO:0000313|EMBL:PTX91426.1};
OS Opitutus sp. ER46.
OC Bacteria; Verrucomicrobiota; Opitutae; Opitutales; Opitutaceae; Opitutus.
OX NCBI_TaxID=2161864 {ECO:0000313|EMBL:PTX91426.1, ECO:0000313|Proteomes:UP000244023};
RN [1] {ECO:0000313|EMBL:PTX91426.1, ECO:0000313|Proteomes:UP000244023}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ER46 {ECO:0000313|EMBL:PTX91426.1,
RC ECO:0000313|Proteomes:UP000244023};
RA Buenger W., Mueller J., Hurek T., Reinhold-Hurek B.;
RT "Genomic and phenotypic characterization of four novel plant-associated
RT Verrucomicrobia indicate a new subdivision with one cultivated member.";
RL Submitted (MAR-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
CC {ECO:0000256|ARBA:ARBA00010641}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PTX91426.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; QAYX01000024; PTX91426.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2T6CML3; -.
DR InParanoid; A0A2T6CML3; -.
DR OrthoDB; 195458at2; -.
DR Proteomes; UP000244023; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR CDD; cd06171; Sigma70_r4; 1.
DR Gene3D; 1.10.1740.10; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR039425; RNA_pol_sigma-70-like.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR007630; RNA_pol_sigma70_r4.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR PANTHER; PTHR43133:SF51; ECF RNA POLYMERASE SIGMA-E FACTOR; 1.
DR PANTHER; PTHR43133; RNA POLYMERASE ECF-TYPE SIGMA FACTO; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR Pfam; PF04545; Sigma70_r4; 1.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000244023};
KW Sigma factor {ECO:0000256|ARBA:ARBA00023082};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 24..93
FT /note="RNA polymerase sigma-70 region 2"
FT /evidence="ECO:0000259|Pfam:PF04542"
FT DOMAIN 125..173
FT /note="RNA polymerase sigma-70 region 4"
FT /evidence="ECO:0000259|Pfam:PF04545"
FT COILED 257..319
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 536 AA; 57913 MW; 36EAD4695706A117 CRC64;
MTGSDAELLQ RYVSAGAEEA FAELVRRHID GVYSAAVRRV GGDTHLAEDV VQQVFAALAQ
NAAALVRHPA LSAWLYVSTR NQAVNVVRRE RRRKTRELEA MAMRENEPEA EAIDWRRVAP
VLDAAIDQLN ETDRTAVVLR YIERRSFAEV GATLRVSEDA ARMRVDRALE RMRLSLQRAG
VSSTAAALGL VLTNHAVGAA PVGLAASVTT AALTAPPVAA ASGALIGFMS TTKVIAGAVG
IAALVAIGTA TRQAYVLRQA EHALTAATQD NESLDTRRQL AVRRAVTAEE AITGLDKSIA
DAQAAKAQQE QRAKLLAAAT GRPSAAALSA GQALMDRYPE LRQAVIAYAR AQVYARFGPY
MRNRNLTPEQ EELFVNWMVL DSGSVRRLTG PDGEPIMLAV PDWGNREKRR EMERTLGQML
GMEAGQELRT FVEQYPARTL ASSLAGSLYF TDTPLTAEQS TALVAAVAEA SKLNRKTGWN
GQYDWAAVLP KAKPVLSESQ YAVLTSYQTQ QVFEARMMAA LRGDGAAAQA STNPNR
//
