ID A0A2T7CJJ7_9POAL Unreviewed; 621 AA.
AC A0A2T7CJJ7;
DT 18-JUL-2018, integrated into UniProtKB/TrEMBL.
DT 18-JUL-2018, sequence version 1.
DT 27-MAR-2024, entry version 17.
DE RecName: Full=C3H1-type domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=GQ55_8G015200 {ECO:0000313|EMBL:PUZ43504.1};
OS Panicum hallii var. hallii.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Panicodae; Paniceae; Panicinae; Panicum;
OC Panicum sect. Panicum.
OX NCBI_TaxID=1504633 {ECO:0000313|EMBL:PUZ43504.1, ECO:0000313|Proteomes:UP000244336};
RN [1] {ECO:0000313|EMBL:PUZ43504.1, ECO:0000313|Proteomes:UP000244336}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. HAL2 {ECO:0000313|Proteomes:UP000244336};
RA Lovell J., Jenkins J., Lowry D., Mamidi S., Sreedasyam A., Weng X.,
RA Barry K., Bonette J., Campitelli B., Daum C., Gordon S., Gould B.,
RA Lipzen A., MacQueen A., Palacio-Mejia J., Plott C., Shakirov E., Shu S.,
RA Yoshinaga Y., Zane M., Rokhsar D., Grimwood J., Schmutz J., Juenger T.;
RT "WGS assembly of Panicum hallii var. hallii HAL2.";
RL Submitted (APR-2018) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM009756; PUZ43504.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2T7CJJ7; -.
DR STRING; 1504633.A0A2T7CJJ7; -.
DR EnsemblPlants; PUZ43504; PUZ43504; GQ55_8G015200.
DR Gramene; PUZ43504; PUZ43504; GQ55_8G015200.
DR Proteomes; UP000244336; Chromosome 8.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR CDD; cd12458; RRM_AtC3H46_like; 1.
DR Gene3D; 3.30.1370.210; -; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR InterPro; IPR034365; AtC3H46-like_RRM.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR032297; Torus.
DR InterPro; IPR000571; Znf_CCCH.
DR InterPro; IPR036855; Znf_CCCH_sf.
DR PANTHER; PTHR24009:SF17; NUCLEIC ACID BINDING PROTEIN; 1.
DR PANTHER; PTHR24009; RNA-BINDING (RRM/RBD/RNP MOTIFS); 1.
DR Pfam; PF00076; RRM_1; 1.
DR Pfam; PF16131; Torus; 1.
DR SMART; SM00360; RRM; 1.
DR SMART; SM00356; ZnF_C3H1; 1.
DR SUPFAM; SSF90229; CCCH zinc finger; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS50102; RRM; 1.
DR PROSITE; PS50103; ZF_C3H1; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|PROSITE-
KW ProRule:PRU00723}; Reference proteome {ECO:0000313|Proteomes:UP000244336};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176};
KW Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|PROSITE-ProRule:PRU00723};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00723}.
FT DOMAIN 141..163
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 241..317
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT ZN_FING 141..163
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT REGION 64..99
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 463..621
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 370..397
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 68..82
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 466..480
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 513..538
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 621 AA; 68561 MW; ABBE2C23F9D26A7D CRC64;
MDAWEATKVV FDRVRVLDPD NASKIMGLLL IQDNSDKELI RLAFSPEHLL HAFVASARAE
LAGKPASPPS PVLDPLQTGP PRGVPSPGSG DHQSPFAAAD HVGYDGGDAL YPENEYDCWS
PVSGHRRSFS LGDAEVAAWR PCMYFARGNC RNGSSCRFLH GLPEDDAAAT EREMAVMRAK
ALAAARPQQH MAPAFPFSPS PPKGVNLNFL LHHQQQHEPQ RFPVRSPRMD RGDLIASPAA
RQIYLTFPAD STFSEEDVSN YFSMYGPVQD VRIPYQQKRM FGFVTFIYAE SVKIILNKGN
PHFVCNARVL VKPYKEKGKI PDRFRKLQHP HHGDFAGCTS PTGLLDSRDP FDLQQPQIGP
RMMYRNIANH EAFLRRKLEE QQQAAELQQA IEMEQRRFMG LQLLDLRSRG HHLGSPMRLG
QADGKGSVNG NGSDIHLEDV IIQDNKLNST VLAMSAPAAA AISATDAEGK HEEQQEDDGD
ASPKQTVNLG EVEKREYGPV TATQNVGCDF QESRGTRRGR RCGSRPRAEP ERGWSGRSSV
RRRRPSSGRG WRSAWRRCSV RNRSSGGSRA WHEGGAGGAW DGGGAPAADE VGARAERADL
GAEAELRRWP SSARGRSSGR R
//
