GenomeNet

Database: UniProt
Entry: A0A2T7E2D8_9POAL
LinkDB: A0A2T7E2D8_9POAL
Original site: A0A2T7E2D8_9POAL 
ID   A0A2T7E2D8_9POAL        Unreviewed;       497 AA.
AC   A0A2T7E2D8;
DT   18-JUL-2018, integrated into UniProtKB/TrEMBL.
DT   18-JUL-2018, sequence version 1.
DT   24-JAN-2024, entry version 18.
DE   RecName: Full=C3H1-type domain-containing protein {ECO:0008006|Google:ProtNLM};
GN   ORFNames=GQ55_4G323600 {ECO:0000313|EMBL:PUZ62001.1};
OS   Panicum hallii var. hallii.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC   Panicoideae; Panicodae; Paniceae; Panicinae; Panicum;
OC   Panicum sect. Panicum.
OX   NCBI_TaxID=1504633 {ECO:0000313|EMBL:PUZ62001.1, ECO:0000313|Proteomes:UP000244336};
RN   [1] {ECO:0000313|EMBL:PUZ62001.1, ECO:0000313|Proteomes:UP000244336}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. HAL2 {ECO:0000313|Proteomes:UP000244336};
RA   Lovell J., Jenkins J., Lowry D., Mamidi S., Sreedasyam A., Weng X.,
RA   Barry K., Bonette J., Campitelli B., Daum C., Gordon S., Gould B.,
RA   Lipzen A., MacQueen A., Palacio-Mejia J., Plott C., Shakirov E., Shu S.,
RA   Yoshinaga Y., Zane M., Rokhsar D., Grimwood J., Schmutz J., Juenger T.;
RT   "WGS assembly of Panicum hallii var. hallii HAL2.";
RL   Submitted (APR-2018) to the EMBL/GenBank/DDBJ databases.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CM009752; PUZ62001.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A2T7E2D8; -.
DR   STRING; 1504633.A0A2T7E2D8; -.
DR   EnsemblPlants; PUZ62001; PUZ62001; GQ55_4G323600.
DR   Gramene; PUZ62001; PUZ62001; GQ55_4G323600.
DR   Proteomes; UP000244336; Chromosome 4.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR   CDD; cd12224; RRM_RBM22; 1.
DR   Gene3D; 3.30.70.330; -; 1.
DR   Gene3D; 4.10.1000.10; Zinc finger, CCCH-type; 1.
DR   InterPro; IPR039171; Cwc2/Slt11.
DR   InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR   InterPro; IPR035979; RBD_domain_sf.
DR   InterPro; IPR000504; RRM_dom.
DR   InterPro; IPR048995; STL11/RBM22-like_N.
DR   InterPro; IPR032297; Torus.
DR   InterPro; IPR000571; Znf_CCCH.
DR   InterPro; IPR036855; Znf_CCCH_sf.
DR   PANTHER; PTHR14089; PRE-MRNA-SPLICING FACTOR RBM22; 1.
DR   PANTHER; PTHR14089:SF6; PRE-MRNA-SPLICING FACTOR RBM22; 1.
DR   Pfam; PF00076; RRM_1; 1.
DR   Pfam; PF21369; STL11_N; 1.
DR   Pfam; PF16131; Torus; 1.
DR   SMART; SM00360; RRM; 1.
DR   SMART; SM00356; ZnF_C3H1; 1.
DR   SUPFAM; SSF90229; CCCH zinc finger; 1.
DR   SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR   PROSITE; PS50102; RRM; 1.
DR   PROSITE; PS50103; ZF_C3H1; 1.
PE   4: Predicted;
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|PROSITE-
KW   ProRule:PRU00723}; Reference proteome {ECO:0000313|Proteomes:UP000244336};
KW   RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW   ProRule:PRU00176};
KW   Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|PROSITE-ProRule:PRU00723};
KW   Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW   ProRule:PRU00723}.
FT   DOMAIN          157..184
FT                   /note="C3H1-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50103"
FT   DOMAIN          228..301
FT                   /note="RRM"
FT                   /evidence="ECO:0000259|PROSITE:PS50102"
FT   ZN_FING         157..184
FT                   /note="C3H1-type"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT   REGION          330..357
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          381..497
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        394..408
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        414..453
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        456..470
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   497 AA;  55428 MW;  6763EB5754A51C62 CRC64;
     MAHRLLRDAQ ADGWERSDFP IICESCLGDN PYVRMLRAEY DKECKICARP FTVFRWRPGR
     DARYKKTEIC QTCCKLKNVC QVCLLDLEYG LPVQVRDTAL AINSNDAIPR SDVNREYFAE
     EHDRRARAGI DYDSSYGKAR PNDTILKLQR TAPYYKRNRA HVCSFYVRGE CTRGAECPYR
     HEMPETGELS QQNIKDRYYG VNDPVAMKLL SKAGEMPSLT PPDDETIRTL YIGGLDSRVT
     EQDLRDQFYA HGEIESIRMV LQRACAFVTY TTREGAEKAA EELANKLVIK GVRLKLMWGK
     PQAPKPEEDE SGRQGQVSHG GLLPRAVISQ QQGSDQPQPP GMEGQHQPPA PASYYFNIPA
     PPAAERTVYP SMDPQRMGAI VKSQDGEGKP GPQQAGQAQP SSSSGQGGYP APPPYYHGQY
     PPYYPPPPPY GSYMQPPRMH YPPQYPPYQP MLAPPAQAHA SSSQQPAQAG QQPPHGPPAQ
     AQQPAPGPSA QQQPSQN
//
DBGET integrated database retrieval system