ID A0A2T7G2V1_9RHOB Unreviewed; 402 AA.
AC A0A2T7G2V1;
DT 18-JUL-2018, integrated into UniProtKB/TrEMBL.
DT 18-JUL-2018, sequence version 1.
DT 27-MAR-2024, entry version 21.
DE SubName: Full=IS3 family transposase {ECO:0000313|EMBL:PVA08747.1};
GN ORFNames=DC366_17585 {ECO:0000313|EMBL:PVA08747.1};
OS Pelagivirga sediminicola.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Paracoccaceae; Pelagivirga.
OX NCBI_TaxID=2170575 {ECO:0000313|EMBL:PVA08747.1, ECO:0000313|Proteomes:UP000244446};
RN [1] {ECO:0000313|EMBL:PVA08747.1, ECO:0000313|Proteomes:UP000244446}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BH-SD19 {ECO:0000313|EMBL:PVA08747.1,
RC ECO:0000313|Proteomes:UP000244446};
RA Ji X.;
RT "Pelagivirga bohaiensis gen. nov., sp. nov., a bacterium isolated from the
RT Bohai Sea.";
RL Submitted (APR-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PVA08747.1}.
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DR EMBL; QCYH01000018; PVA08747.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2T7G2V1; -.
DR OrthoDB; 9814072at2; -.
DR Proteomes; UP000244446; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0004803; F:transposase activity; IEA:InterPro.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR GO; GO:0006313; P:DNA transposition; IEA:InterPro.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR025948; HTH-like_dom.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR048020; Transpos_IS3.
DR InterPro; IPR002514; Transposase_8.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; NF033516; transpos_IS3; 1.
DR PANTHER; PTHR47515:SF2; INTEGRASE CORE DOMAIN PROTEIN-RELATED; 1.
DR PANTHER; PTHR47515; LOW CALCIUM RESPONSE LOCUS PROTEIN T; 1.
DR Pfam; PF13276; HTH_21; 1.
DR Pfam; PF01527; HTH_Tnp_1; 1.
DR Pfam; PF13683; rve_3; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000244446};
KW Transposable element {ECO:0000256|ARBA:ARBA00022464}.
FT DOMAIN 230..399
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
FT COILED 76..103
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 402 AA; 44884 MW; 70D25D1BA2D72630 CRC64;
MSDYEIITDG GRRRRWSSSE KLRIVEETLD EATSISIVAR RNGVAPNLLY RWRRLMLEGG
AVAVSGDDDV TSNRAVRQME DRIRELERHL GRKTLEVEIL KEALDKSRSK KTDVACAVAA
EGRFPMSVVA ETLGVSRSNL HARLTGGAKP RRRYHKAQDA AVVPLITALV AARPTYGYRR
ITAILNRQLR ASGSAPVNHK RVYRIMQAQN LLLARPYMER SDRTHNGKVV TMRSNLRWCS
DGFEFTCWNG DIVRGAFIID AHDREIISWC AVVNAGIAGS DVRDMMLAAV EARFAGHRAP
HQIEMLSDNG SPYIAKDTCI FARQLGLKPC FTPVKSPQSN GISEAFVNTL KRDYVNVTPL
PDAVTVLGLI AGWFEDYNEN HPHSGLKMRS PREFIAAQTA TA
//