ID A0A2T7G7H3_9RHOB Unreviewed; 800 AA.
AC A0A2T7G7H3;
DT 18-JUL-2018, integrated into UniProtKB/TrEMBL.
DT 18-JUL-2018, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE SubName: Full=DNA ligase-associated DEXH box helicase {ECO:0000313|EMBL:PVA10378.1};
GN ORFNames=DC366_09075 {ECO:0000313|EMBL:PVA10378.1};
OS Pelagivirga sediminicola.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Paracoccaceae; Pelagivirga.
OX NCBI_TaxID=2170575 {ECO:0000313|EMBL:PVA10378.1, ECO:0000313|Proteomes:UP000244446};
RN [1] {ECO:0000313|EMBL:PVA10378.1, ECO:0000313|Proteomes:UP000244446}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BH-SD19 {ECO:0000313|EMBL:PVA10378.1,
RC ECO:0000313|Proteomes:UP000244446};
RA Ji X.;
RT "Pelagivirga bohaiensis gen. nov., sp. nov., a bacterium isolated from the
RT Bohai Sea.";
RL Submitted (APR-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PVA10378.1}.
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DR EMBL; QCYH01000004; PVA10378.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2T7G7H3; -.
DR OrthoDB; 9815222at2; -.
DR Proteomes; UP000244446; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016818; F:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; IEA:InterPro.
DR GO; GO:0016874; F:ligase activity; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR CDD; cd17922; DEXHc_LHR-like; 1.
DR CDD; cd18796; SF2_C_LHR; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR013701; DEAD/DEAH_assoc.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR026362; DEXH_lig_assoc.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR017170; Lhr-like_ATP-dep_RNA_helic_prd.
DR InterPro; IPR045628; Lhr_WH_dom.
DR InterPro; IPR027417; P-loop_NTPase.
DR NCBIfam; TIGR04121; DEXH_lig_assoc; 1.
DR PANTHER; PTHR47962; ATP-DEPENDENT HELICASE LHR-RELATED-RELATED; 1.
DR PANTHER; PTHR47962:SF3; LARGE ATP-DEPENDENT HELICASE-RELATED PROTEIN; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF08494; DEAD_assoc; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF19306; Lhr_WH; 1.
DR PIRSF; PIRSF037307; Lhr-like_helic_prd; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Ligase {ECO:0000313|EMBL:PVA10378.1};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000244446}.
FT DOMAIN 26..204
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 235..386
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
SQ SEQUENCE 800 AA; 88112 MW; 3DE5FFE57302BFF6 CRC64;
MIELPPKFTD WFAARGWSVH PHQREMMARS VDPSLLLIAP TGGGKTLAGF LPTLAELGEG
GHKGLHTLYI SPLKALANDI RRNLTTPVEE MGLPIRIEDR TGDTSYTQKR RQRADPPDIL
LTTPESLALL TSYEDAPRIF AGLQRVVIDE IHALADSKRG DQLMLALSRL QALCPGLRRV
GLSATVEDPA AIARFLARHP DPCEIILADP GPDPDIEMLQ VAEPPPWAGG GAAYAIPAVL
EQIKAHNTTL IFHNTRAQAE LFFRNLWLAN DENLAIGIHH GSLDRGQRQR VEGAMQRGEL
RAIVCTGSLD LGIDWGDVDL VIQVSAPKNV KRLVQRIGRA NHRYNAPSKA LLVPANRFEV
VECVAALEAV RARDLDGDPR GPGPLDVLCQ HILIAACSGP FDADRLFAEV TTAGPYAALR
RADFDDCLDF CATGGYALRA YDKWQRLVRR DGLWQLRDPR SAQIVRMNIG TIQDTDLLKV
RMQRGRGGKP LGEIEESFAA TLTPGDTFLI GGQVVRYESL REMTVEVSRS DGRKPKIATF
GGTKFATSTQ LSQRILVMLA QPDWPALPAH TAEWLHLQRR TSRMPTAGRL LIESFPHEGR
EHACIYGFAG RNAQQTLGLL LTKRMEELGL DPLGFVATDY ATLIWGLEPL TDAAPLFDAA
ALRQGLDQWL TGNAVMKRTF RASATIAGLI QRNLPQARKS GRQATFSSDI LYDTLVKYDP
DHLLLRITRT EAMRGLVDFG RIEEMIARVQ GRIDLLRLPR ATPLAAPLFL EVGRTPVSGA
GEERLLAEES ARLMQEAGLA
//
