ID A0A2T7NHW1_POMCA Unreviewed; 1150 AA.
AC A0A2T7NHW1;
DT 18-JUL-2018, integrated into UniProtKB/TrEMBL.
DT 18-JUL-2018, sequence version 1.
DT 24-JAN-2024, entry version 14.
DE RecName: Full=RNA polymerase II assembly factor Rtp1 C-terminal domain-containing protein {ECO:0000259|Pfam:PF10363};
GN ORFNames=C0Q70_18893 {ECO:0000313|EMBL:PVD20732.1};
OS Pomacea canaliculata (Golden apple snail).
OC Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Gastropoda;
OC Caenogastropoda; Architaenioglossa; Ampullarioidea; Ampullariidae; Pomacea.
OX NCBI_TaxID=400727 {ECO:0000313|EMBL:PVD20732.1, ECO:0000313|Proteomes:UP000245119};
RN [1] {ECO:0000313|EMBL:PVD20732.1, ECO:0000313|Proteomes:UP000245119}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SZHN2017 {ECO:0000313|EMBL:PVD20732.1};
RC TISSUE=Muscle {ECO:0000313|EMBL:PVD20732.1};
RA Liu C., Liu B., Ren Y., Zhang Y., Wang H., Li S., Jiang F., Yin L.,
RA Zhang G., Qian W., Fan W.;
RT "The genome of golden apple snail Pomacea canaliculata provides insight
RT into stress tolerance and invasive adaptation.";
RL Submitted (APR-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the Tango6 family.
CC {ECO:0000256|ARBA:ARBA00005724}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PVD20732.1}.
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DR EMBL; PZQS01000012; PVD20732.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2T7NHW1; -.
DR EnsemblMetazoa; XM_025220555.1; XP_025076340.1; LOC112553382.
DR OrthoDB; 7790at2759; -.
DR Proteomes; UP000245119; Miscellaneous, Linkage group lg12.
DR Gene3D; 1.25.10.10; Leucine-rich Repeat Variant; 1.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR019451; Rtp1_C1.
DR InterPro; IPR039600; TANGO6/Rtp1.
DR PANTHER; PTHR20959; TRANSPORT AND GOLGI ORGANIZATION PROTEIN 6 FAMILY MEMBER; 1.
DR PANTHER; PTHR20959:SF1; TRANSPORT AND GOLGI ORGANIZATION PROTEIN 6 HOMOLOG; 1.
DR Pfam; PF10363; RTP1_C1; 1.
DR SUPFAM; SSF48371; ARM repeat; 2.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000245119}.
FT DOMAIN 881..1001
FT /note="RNA polymerase II assembly factor Rtp1 C-terminal"
FT /evidence="ECO:0000259|Pfam:PF10363"
SQ SEQUENCE 1150 AA; 127769 MW; C4A0CC457491B13E CRC64;
MSHNTVADVK LEQVIGALHI LLSPDLDKGS QSDKVTGTRD TVLQKLQRNI QNLEIHLSES
NQQPLQVLLS EETVIHRHFK ASQSVEWVFV FKVLELLRVA CLLLLHLQKE AAQITPESSE
EVRSKVRGPD HPKYAPPLAK TTLSIQQTNT IRSALQFVTF LGMCPHFLAG VGIPVQLRSK
ATILFSTTPD DVNCREESME SKRAKLWLCT STLITMLEVP ELRGLIMVGH VNDVLAALLQ
LSFGYSDMES TDTQPSGIES EGSSEDHCMC PVSAFSYEEK NKVDRCFDGQ TSGLQTSVKD
ELRQDRCITW NVSKCREALE KVLAIANPDQ VVRELLVIQN GIPQNLKDLP GAPNQPPAWL
KRACVKYLVK ILSGPKGIQH LYAAMMAGVD PSSPSHWQHC QTLARLAARL PLPRQQVEQY
VHSISQQLFE ILHANEGASK LQVSQLIGSI VNEMMMVHRQ HIELFFLRPL LGPLYKCLDD
SAVEGKDHVI VREEELSTCL EDMQKVYVNG QQPQASILST LQPVMGALWA LFCFTQDGVS
SVRRIVRELI IKFLKNLSCD QAAVLLQHFS ISHTVGATEG NFPSVALSVI FVHGSHGGIK
AVRTNGERIL KLGEDSQINA VIDILKDMKT DGVAGELLVS LLKELTEIVS RETQQAGVVL
PARVERLEVK VEKEKELRKK VTLLHLLASI CETFGSECLV KPSQILLFVK ASLERAVTIC
QGISEREMAI FESETMSMAL GLLTAILAGA VLIGETERNL LDEMMPQLSI IGQGHPDESI
REMAGDLRIA IATRGAVWPT LEEKKQKEQE ISKHQLVMED SVKLTTKMQH PTSFTKTLIE
ELPDPPSVIP AVDSFQAASH KSSSVQNSNT VSGQSARSKL AEAFEQLCDP LLPVRGHALI
TLTKLVEARD PETLSKKDVV QKIFYENMQH GDSYLYLTAI NGMSALADRF SESVVPVLAA
EFAGFNRQKS NPSAGQNMLT SEHRLKLGEA LMKATRNLGE LVPKYREVLL AAVMTGTHDE
DPIVKASSLS NLAELCRLLR FSLGPVLHEV FNCCSCFLVN EQDLVRRAAC MTLTKILEGL
DKDALTVLDC ILKDLYHLLK KLHERDPDKT VRLHANMALV QLDTMARNFL FPKQTLQKKI
QVLSNEDTYR
//
