ID A0A2U1B1Y4_9BACT Unreviewed; 877 AA.
AC A0A2U1B1Y4;
DT 18-JUL-2018, integrated into UniProtKB/TrEMBL.
DT 18-JUL-2018, sequence version 1.
DT 27-MAR-2024, entry version 25.
DE SubName: Full=Topoisomerase-4 subunit A {ECO:0000313|EMBL:PVY42704.1};
GN ORFNames=C8D82_11010 {ECO:0000313|EMBL:PVY42704.1};
OS Victivallis vadensis.
OC Bacteria; Lentisphaerota; Lentisphaeria; Victivallales; Victivallaceae;
OC Victivallis.
OX NCBI_TaxID=172901 {ECO:0000313|EMBL:PVY42704.1, ECO:0000313|Proteomes:UP000245959};
RN [1] {ECO:0000313|EMBL:PVY42704.1, ECO:0000313|Proteomes:UP000245959}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 14823 {ECO:0000313|EMBL:PVY42704.1,
RC ECO:0000313|Proteomes:UP000245959};
RA Goeker M.;
RT "Genomic Encyclopedia of Type Strains, Phase IV (KMG-IV): sequencing the
RT most valuable type-strain genomes for metagenomic binning, comparative
RT biology and taxonomic classification.";
RL Submitted (APR-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP-dependent breakage, passage and rejoining of double-
CC stranded DNA.; EC=5.6.2.2; Evidence={ECO:0000256|ARBA:ARBA00000185};
CC -!- SIMILARITY: Belongs to the type II topoisomerase GyrA/ParC subunit
CC family. {ECO:0000256|ARBA:ARBA00008263}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PVY42704.1}.
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DR EMBL; QEKH01000010; PVY42704.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2U1B1Y4; -.
DR OrthoDB; 9806486at2; -.
DR Proteomes; UP000245959; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003918; F:DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity; IEA:UniProtKB-EC.
DR GO; GO:0006265; P:DNA topological change; IEA:InterPro.
DR Gene3D; 3.30.1360.40; -; 1.
DR Gene3D; 3.90.199.10; Topoisomerase II, domain 5; 1.
DR Gene3D; 1.10.268.10; Topoisomerase, domain 3; 1.
DR InterPro; IPR013760; Topo_IIA-like_dom_sf.
DR InterPro; IPR013758; Topo_IIA_A/C_ab.
DR InterPro; IPR013757; Topo_IIA_A_a_sf.
DR InterPro; IPR002205; Topo_IIA_dom_A.
DR PANTHER; PTHR43493:SF5; DNA GYRASE SUBUNIT A, CHLOROPLASTIC_MITOCHONDRIAL; 1.
DR PANTHER; PTHR43493; DNA GYRASE/TOPOISOMERASE SUBUNIT A; 1.
DR Pfam; PF00521; DNA_topoisoIV; 1.
DR SMART; SM00434; TOP4c; 1.
DR SUPFAM; SSF56719; Type II DNA topoisomerase; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Isomerase {ECO:0000256|ARBA:ARBA00023235, ECO:0000313|EMBL:PVY42704.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000245959};
KW Topoisomerase {ECO:0000256|ARBA:ARBA00023029}.
FT DOMAIN 48..477
FT /note="DNA topoisomerase type IIA"
FT /evidence="ECO:0000259|SMART:SM00434"
FT REGION 1..38
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 687..877
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 698..714
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 729..743
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 789..810
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 877 AA; 98011 MW; 9BF8E326AD06BEEA CRC64;
MSDEPEKNEL DAPVPLDAEV VSENDDTAEN GDPNSVAAER YRGNNDYFRT MMDRNFLEYA
SYVIKDRAIP DVDDGLKPVQ RRVLWALYQV YDGRTHKVAN VVGNTMHYHP HGNASIEDAL
VVLANKEYYI TRQGNFGNIL TGSPAAAGRY IECSLSPLGH EVLFNNDITE FVDTYDGRGV
EPVTLPAKVP SLLMLGSDGI AVGMATKIMP HNFNELLEAE IAVLRGEEFE LYPDFQQGGL
MDVREYNDGN GKITLRAKIE IVGRDLIIRE IPATTSTETL VASIEKAAEK NKIKISSVND
YTTDKVEIKV VPTRGYDPEK TMQGLYMYTD CSVSISVNMT VIRENRPVQM SVSEVLRRNA
DKLLEYLKRE LEIDLAKQED LFHAKTLAQI FFENRIYKKI EECKSEKEEY TEVHAGLAPF
RHLLRRDVTD QDIDKLLALP VRRISRFDIE KNQRELAEVL AKMEEIKKNL GSLKKYAINY
LRKLLDKYGK DFPRRTEIEH FEKIDRREAA LNNIKVGWDR KNGYVGTSIK SDDILACNEF
DRFLCVEKSG SYKVIALPPE KLFIGKLYDF RKYDAATEFG VIYRETKSGK YYGKRTAIGG
FILDKEYNLC PVGCKLELLT PRADAVYMLT VAGARGKQQQ TELNLMELPA RSPKARGILI
SSKPIVKITH NRYLTPEELA ALSLKTESDD EITDENDESA NGGGNGNAGT ASGETAAVPQ
AAEPVDPPEL SEPVKKIEKP ASEVTAKITE TVEKSAQAPS KKVPEVTEDA PPWDTADGAT
VVMEKEVAAP EPAKPKKKAG EAKPHSELPP PEVHPVDFGV EQPPNFDEPL VLTADPEPPR
KPRHKPAAPS VPKEPRIQVP PPDGDDEFGI VQPEFGF
//