ID A0A2U1JPL5_9FLAO Unreviewed; 707 AA.
AC A0A2U1JPL5;
DT 18-JUL-2018, integrated into UniProtKB/TrEMBL.
DT 18-JUL-2018, sequence version 1.
DT 24-JAN-2024, entry version 16.
DE SubName: Full=RNA-binding transcriptional accessory protein {ECO:0000313|EMBL:PWA06945.1};
GN ORFNames=DB895_02910 {ECO:0000313|EMBL:PWA06945.1};
OS Flavobacterium psychrotolerans.
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae; Flavobacterium.
OX NCBI_TaxID=2169410 {ECO:0000313|EMBL:PWA06945.1, ECO:0000313|Proteomes:UP000245449};
RN [1] {ECO:0000313|EMBL:PWA06945.1, ECO:0000313|Proteomes:UP000245449}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=RB1R5 {ECO:0000313|EMBL:PWA06945.1,
RC ECO:0000313|Proteomes:UP000245449};
RA Liu Q., Xin Y.-H.;
RT "Flavobacterium sp. nov., isolated from glacier ice.";
RL Submitted (APR-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PWA06945.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; QCZI01000002; PWA06945.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2U1JPL5; -.
DR OrthoDB; 9804714at2; -.
DR Proteomes; UP000245449; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR CDD; cd05685; S1_Tex; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 1.10.10.650; RuvA domain 2-like; 1.
DR Gene3D; 1.10.3500.10; Tex N-terminal region-like; 1.
DR Gene3D; 1.10.150.310; Tex RuvX-like domain-like; 1.
DR Gene3D; 3.30.420.140; YqgF/RNase H-like domain; 1.
DR InterPro; IPR041692; HHH_9.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR010994; RuvA_2-like.
DR InterPro; IPR003029; S1_domain.
DR InterPro; IPR044146; S1_Tex.
DR InterPro; IPR023323; Tex-like_dom_sf.
DR InterPro; IPR023319; Tex-like_HTH_dom_sf.
DR InterPro; IPR018974; Tex-like_N.
DR InterPro; IPR032639; Tex_YqgF.
DR InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF10; S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1; 1.
DR Pfam; PF12836; HHH_3; 1.
DR Pfam; PF17674; HHH_9; 1.
DR Pfam; PF00575; S1; 1.
DR Pfam; PF09371; Tex_N; 1.
DR Pfam; PF16921; Tex_YqgF; 1.
DR SMART; SM00316; S1; 1.
DR SMART; SM00732; YqgFc; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR SUPFAM; SSF47781; RuvA domain 2-like; 2.
DR SUPFAM; SSF158832; Tex N-terminal region-like; 1.
DR PROSITE; PS50126; S1; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000245449}.
FT DOMAIN 637..706
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
SQ SEQUENCE 707 AA; 79678 MW; DB4532971F204D9D CRC64;
MTNIQFISKF IATAAINIQN TVKLLEEDCT IPFISRYRKD KTGNLDEVQI EQIAKLQKDY
EVIVKRKEAI LKSIEEQKAL SQELNEKIQG SFDLQELEDF YLPFKKKKKT RADVARENGL
EPLSKIIMAQ NNEDVDFISS KFLNEKVKNE DEALQGARDI IAEWINENIY VRKQLRRLFQ
RKATITTKVV KTKKDDDKSQ KFDQYFDWSE TLTKAPSHRL LAMLRAENEG FVKMKIEVET
EEAIEIIDEL IIKKKNDTTP HLQLAIEDSY KRLLNPAISN EALQEAKAKA DANSIQVFAN
NLGQLLLAPP LGEKRILAID PGFRSGCKIV CLDEKGDLLY NETIYPHAPQ KEDVMAMKKI
RSMVNSYKID AISIGNGTAS RETEFFIKKI AFDKPVQVFI VSEAGASVYS ASKIAREEFP
NYDVTVRGSV SIGRRLSDPL AELVKIDPKA IGVGQYQHDV DQNKLKEELD NTVIRCVNSV
GVNINTASKH LLSYVSGIGE KLAENIVQYR SENGPFEDRK QLKKVPRLGE KAYQQGVAFI
RISNAKNPLD NSAVHPEAYG IVEKMAKDLK ISVNDLIANS AKTALIKPEN YVTSEIGLLG
LKDIIKELEK PGLDPRKSAK VFEFDPNVKT IKDVKSGMIL PGIVNNITNF GCFVDIGVKE
SGLVHISQLK AGFVSDVNEV VKLHQHVQVK VTEVDEERQR IQLSMIV
//
