ID A0A2U1N3V2_ARTAN Unreviewed; 523 AA.
AC A0A2U1N3V2;
DT 18-JUL-2018, integrated into UniProtKB/TrEMBL.
DT 18-JUL-2018, sequence version 1.
DT 27-MAR-2024, entry version 10.
DE SubName: Full=Zinc finger, CCHC-type, Retrotransposon gag domain protein {ECO:0000313|EMBL:PWA68156.1};
GN ORFNames=CTI12_AA310700 {ECO:0000313|EMBL:PWA68156.1};
OS Artemisia annua (Sweet wormwood).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae;
OC Artemisiinae; Artemisia.
OX NCBI_TaxID=35608 {ECO:0000313|EMBL:PWA68156.1, ECO:0000313|Proteomes:UP000245207};
RN [1] {ECO:0000313|EMBL:PWA68156.1, ECO:0000313|Proteomes:UP000245207}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Huhao1 {ECO:0000313|Proteomes:UP000245207};
RC TISSUE=Leaf {ECO:0000313|EMBL:PWA68156.1};
RX PubMed=29703587; DOI=10.1016/j.molp.2018.03.015;
RA Shen Q., Zhang L., Liao Z., Wang S., Yan T., Shi P., Liu M., Fu X., Pan Q.,
RA Wang Y., Lv Z., Lu X., Zhang F., Jiang W., Ma Y., Chen M., Hao X., Li L.,
RA Tang Y., Lv G., Zhou Y., Sun X., Brodelius P.E., Rose J.K.C., Tang K.;
RT "The genome of Artemisia annua provides insight into the evolution of
RT Asteraceae family and artemisinin biosynthesis.";
RL Mol. Plant 11:776-788(2018).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PWA68156.1}.
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DR EMBL; PKPP01003695; PWA68156.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2U1N3V2; -.
DR Proteomes; UP000245207; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd00303; retropepsin_like; 1.
DR Gene3D; 4.10.60.10; Zinc finger, CCHC-type; 1.
DR InterPro; IPR032567; LDOC1-rel.
DR InterPro; IPR005162; Retrotrans_gag_dom.
DR InterPro; IPR001878; Znf_CCHC.
DR InterPro; IPR036875; Znf_CCHC_sf.
DR PANTHER; PTHR15503; LDOC1 RELATED; 1.
DR PANTHER; PTHR15503:SF43; REVERSE TRANSCRIPTASE RNASE H-LIKE DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF03732; Retrotrans_gag; 1.
DR Pfam; PF08284; RVP_2; 1.
DR SMART; SM00343; ZnF_C2HC; 2.
DR SUPFAM; SSF57756; Retrovirus zinc finger-like domains; 1.
DR PROSITE; PS50158; ZF_CCHC; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Reference proteome {ECO:0000313|Proteomes:UP000245207};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00047}.
FT DOMAIN 348..363
FT /note="CCHC-type"
FT /evidence="ECO:0000259|PROSITE:PS50158"
FT REGION 1..46
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 294..318
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 15..45
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 523 AA; 59820 MW; 9D44B536CF491B06 CRC64;
MDTPHPKEAT KATASKHAES SANDAGDNEK GYESSSSSSS PEGLNFRGFT KEEMKTLNAM
MAKRVGKSIK KSMPYYINKT TDNMQKIFHE EIGKLKKSGE LMNDLNARPG VGKEKSTYRD
FTACALPIFT ESLDPLKSFR WITDIEGAFR TSRCAEEDKV NFPTNCLHER AKIWWEGKAN
EKGSAWREMC TWEQFKEVFT KEYAPAKEID KIREAFHNLI QTNESVNELW GKFCDMVQYC
PEYRDNEKLK VDKFQRMLKD EIRTIVSPFK CTTIEDLLSR ARIREADLDR IKGKEKKELK
RKQEQPTPFG KRGKFDFTRR DNTGKLPPQC NRCGKNHMGE CKSEMKGCFK CGDPSHISKN
CTKPLVICYG CNEERHKLSE CPKVNPRKSK PSNLAKEEKV VVPKPKARVY QMGVKEAKSG
SDVITGTILV KSKPARVLYD SDASMSFVSY SFSKELSTPL EKLPTPIEVE IADSKIVVVS
NVYRNVEIDE KPGRIWEDYQ ECVRVSIHKE KREGKSKLLA KLK
//
