ID   A0A2U2PL79_9SPHI        Unreviewed;       739 AA.
AC   A0A2U2PL79;
DT   18-JUL-2018, integrated into UniProtKB/TrEMBL.
DT   18-JUL-2018, sequence version 1.
DT   24-JAN-2024, entry version 16.
DE   SubName: Full=RNA-binding transcriptional accessory protein {ECO:0000313|EMBL:PWG82034.1};
GN   ORFNames=DDR33_03155 {ECO:0000313|EMBL:PWG82034.1};
OS   Pararcticibacter amylolyticus.
OC   Bacteria; Bacteroidota; Sphingobacteriia; Sphingobacteriales;
OC   Sphingobacteriaceae; Pararcticibacter.
OX   NCBI_TaxID=2173175 {ECO:0000313|EMBL:PWG82034.1, ECO:0000313|Proteomes:UP000245647};
RN   [1] {ECO:0000313|EMBL:PWG82034.1, ECO:0000313|Proteomes:UP000245647}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=FJ4-8 {ECO:0000313|EMBL:PWG82034.1,
RC   ECO:0000313|Proteomes:UP000245647};
RA   Cai Y.;
RT   "Pedobacter chongqingensis sp. nov., isolated from a rottenly hemp rope.";
RL   Submitted (APR-2018) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:PWG82034.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; QEAS01000002; PWG82034.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A2U2PL79; -.
DR   OrthoDB; 9804714at2; -.
DR   Proteomes; UP000245647; Unassembled WGS sequence.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR   CDD; cd05685; S1_Tex; 1.
DR   Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR   Gene3D; 1.10.10.650; RuvA domain 2-like; 1.
DR   Gene3D; 1.10.3500.10; Tex N-terminal region-like; 1.
DR   Gene3D; 1.10.150.310; Tex RuvX-like domain-like; 1.
DR   Gene3D; 3.30.420.140; YqgF/RNase H-like domain; 1.
DR   InterPro; IPR041692; HHH_9.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR010994; RuvA_2-like.
DR   InterPro; IPR003029; S1_domain.
DR   InterPro; IPR044146; S1_Tex.
DR   InterPro; IPR023323; Tex-like_dom_sf.
DR   InterPro; IPR023319; Tex-like_HTH_dom_sf.
DR   InterPro; IPR018974; Tex-like_N.
DR   InterPro; IPR032639; Tex_YqgF.
DR   InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR   InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR   PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR   PANTHER; PTHR10724:SF10; S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1; 1.
DR   Pfam; PF12836; HHH_3; 1.
DR   Pfam; PF17674; HHH_9; 1.
DR   Pfam; PF00575; S1; 1.
DR   Pfam; PF09371; Tex_N; 1.
DR   Pfam; PF16921; Tex_YqgF; 1.
DR   SMART; SM00316; S1; 1.
DR   SMART; SM00732; YqgFc; 1.
DR   SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR   SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR   SUPFAM; SSF47781; RuvA domain 2-like; 2.
DR   SUPFAM; SSF158832; Tex N-terminal region-like; 1.
DR   PROSITE; PS50126; S1; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000245647}.
FT   DOMAIN          637..706
FT                   /note="S1 motif"
FT                   /evidence="ECO:0000259|PROSITE:PS50126"
FT   REGION          704..725
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   739 AA;  82068 MW;  D504B533C0CEEF75 CRC64;
     MIAHFKKIAA ELSLSEKQVS TTVALLNEGA TVPFISRYRK EMTGSLDEVQ IAAIRDRAEQ
     LRELDKRREA ILKSLTELGK LSPELEKSLH EAETLSVLED LYLPYRPKRK TRASAAREKG
     LQPLADRILE QGAFDILAEA SKFVDDQKGV NSDAEALAGA RDIIAEQISE NADARAKIRE
     LFIEKGEFSS KVIEGKEEEG AKYKDYFEWT EPVKTAPSHR ILAMRRGEKE LVLSLDVYPP
     EDDSIAILDR FFVKGNTAAS DQVRLAVADS FKRLLKPSME TEIRLLTKKK ADEEAIRVFA
     ENARQLLLAA PMGQKRIMAI DPGFRTGCKV VCLDEQGQLL ENTTIYPHTG AGGAAEAQKT
     VIHLAGRYSV EAIAIGNGTA GRETEAFIRA LNLPALQIVM VNESGASIYS ASEVAREEFP
     DKDVTVRGAV SIGRRLMDPL AELVKIDPKS IGVGQYQHDV DQNKLQTSLD DTVISCVNAV
     GVELNTASKQ ILAYVSGLGP QLAKSIVEFR NKNGAFKRRE ELKQVPRLGE KAFEQSAGFL
     RIRNAENPLD ASAVHPERYT LVKQIAKDLD CTVEDLMKDD TLRKKIKPEK YVSEKVGLPT
     LNDILQELAK PGRDPREKFE TFSFTDGVNE IGDLRTGMKL PGIVTNITNF GAFVDIGVHQ
     DGLVHLSQLS NRFVKDPNEV VKVHQKVEVT VTEVDVARRR ISLSMKKEER PAQQQKKGEK
     RPEKVDFNAK LAALKSKFS
//