ID A0A2U3X5J5_ODORO Unreviewed; 255 AA.
AC A0A2U3X5J5;
DT 18-JUL-2018, integrated into UniProtKB/TrEMBL.
DT 18-JUL-2018, sequence version 1.
DT 27-MAR-2024, entry version 27.
DE SubName: Full=SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like {ECO:0000313|RefSeq:XP_004417669.1};
GN Name=LOC101370206 {ECO:0000313|RefSeq:XP_004417669.1};
OS Odobenus rosmarus divergens (Pacific walrus).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae;
OC Odobenus.
OX NCBI_TaxID=9708 {ECO:0000313|Proteomes:UP000245340, ECO:0000313|RefSeq:XP_004417669.1};
RN [1] {ECO:0000313|RefSeq:XP_004417669.1}
RP IDENTIFICATION.
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SIMILARITY: Belongs to the MHC class II family.
CC {ECO:0000256|RuleBase:RU004238}.
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DR RefSeq; XP_004417669.1; XM_004417612.1.
DR AlphaFoldDB; A0A2U3X5J5; -.
DR SMR; A0A2U3X5J5; -.
DR STRING; 9708.A0A2U3X5J5; -.
DR GeneID; 101370206; -.
DR KEGG; oro:101370206; -.
DR InParanoid; A0A2U3X5J5; -.
DR OrthoDB; 4118190at2759; -.
DR Proteomes; UP000245340; Unplaced.
DR GO; GO:0042613; C:MHC class II protein complex; IEA:UniProtKB-KW.
DR GO; GO:0002250; P:adaptive immune response; IEA:UniProtKB-KW.
DR GO; GO:0002504; P:antigen processing and presentation of peptide or polysaccharide antigen via MHC class II; IEA:UniProtKB-KW.
DR CDD; cd21008; IgC1_MHC_II_alpha_HLA-DQ; 1.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR InterPro; IPR007110; Ig-like_dom.
DR InterPro; IPR036179; Ig-like_dom_sf.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR003006; Ig/MHC_CS.
DR InterPro; IPR003597; Ig_C1-set.
DR InterPro; IPR011162; MHC_I/II-like_Ag-recog.
DR InterPro; IPR014745; MHC_II_a/b_N.
DR InterPro; IPR001003; MHC_II_a_N.
DR PANTHER; PTHR19944:SF59; HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DQ ALPHA 1 CHAIN; 1.
DR PANTHER; PTHR19944; MHC CLASS II-RELATED; 1.
DR Pfam; PF07654; C1-set; 1.
DR Pfam; PF00993; MHC_II_alpha; 1.
DR SMART; SM00407; IGc1; 1.
DR SMART; SM00920; MHC_II_alpha; 1.
DR SUPFAM; SSF48726; Immunoglobulin; 1.
DR SUPFAM; SSF54452; MHC antigen-recognition domain; 1.
DR PROSITE; PS50835; IG_LIKE; 1.
DR PROSITE; PS00290; IG_MHC; 1.
PE 3: Inferred from homology;
KW Adaptive immunity {ECO:0000256|ARBA:ARBA00023130};
KW Glycoprotein {ECO:0000256|ARBA:ARBA00023180};
KW Immunity {ECO:0000256|ARBA:ARBA00022859};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW MHC II {ECO:0000256|ARBA:ARBA00023182};
KW Reference proteome {ECO:0000313|Proteomes:UP000245340};
KW Signal {ECO:0000256|SAM:SignalP}; Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT SIGNAL 1..23
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 24..255
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5015483757"
FT TRANSMEM 222..240
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 113..193
FT /note="Ig-like"
FT /evidence="ECO:0000259|PROSITE:PS50835"
SQ SEQUENCE 255 AA; 28310 MW; DD915F8DB65B074E CRC64;
MTLNRVLILG TLTLTTMMSP SGGEDIVADH FASYGINVYQ SYGSWGQYTH EFDGDEQFYV
DLEKKETVWQ LPVFQTFTSF DPQGALRNLA IAKHNLNILT KRSNSTAATN EVPEVTVFLK
SPAMLGQPNT LICFVDNIFP PVINVTWLKN RRSVTEGVSE TSFLAKRDHS FLKISYLTFL
PSADDIYDCK VEHWGLDEPL LKHWEPEIPT PMSELTETVV CALGLTVGLV GIVVGTVFII
QGLRSGGASR HQGPL
//
