ID A0A2U9AUZ8_SCOMX Unreviewed; 334 AA.
AC A0A2U9AUZ8;
DT 12-SEP-2018, integrated into UniProtKB/TrEMBL.
DT 12-SEP-2018, sequence version 1.
DT 27-MAR-2024, entry version 24.
DE SubName: Full=Muscle RING finger 1 {ECO:0000313|EMBL:AWO95482.1};
GN Name=trim63a {ECO:0000313|Ensembl:ENSSMAP00000000023.1};
GN ORFNames=F2P81_002884 {ECO:0000313|EMBL:KAF0046355.1}, SMAX5B_002139
GN {ECO:0000313|EMBL:AWO95482.1};
OS Scophthalmus maximus (Turbot) (Psetta maxima).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Carangaria; Pleuronectiformes; Pleuronectoidei; Scophthalmidae;
OC Scophthalmus.
OX NCBI_TaxID=52904 {ECO:0000313|EMBL:AWO95482.1, ECO:0000313|Proteomes:UP000246464};
RN [1] {ECO:0000313|EMBL:AWO95482.1, ECO:0000313|Proteomes:UP000246464}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Martinez P.;
RT "Integrating genomic resources of turbot (Scophthalmus maximus) in depth
RT evaluation of genetic and physical mapping variation across individuals.";
RL Submitted (DEC-2017) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:KAF0046355.1, ECO:0000313|Proteomes:UP000438429}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Ysfricsl-2016a {ECO:0000313|EMBL:KAF0046355.1};
RC TISSUE=Blood {ECO:0000313|EMBL:KAF0046355.1};
RA Xu H., Xu X.-W., Shao C., Chen S.;
RT "Draft genomes of female and male turbot (Scophthalmus maximus).";
RL Submitted (JUN-2019) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|Ensembl:ENSSMAP00000000023.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (SEP-2023) to UniProtKB.
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DR EMBL; CP026243; AWO95482.1; -; Genomic_DNA.
DR EMBL; VEVO01000002; KAF0046355.1; -; Genomic_DNA.
DR STRING; 52904.ENSSMAP00000000023; -.
DR Ensembl; ENSSMAT00000000024.2; ENSSMAP00000000023.1; ENSSMAG00000000014.2.
DR GeneTree; ENSGT00940000166042; -.
DR OMA; CANDLYE; -.
DR OrthoDB; 5383069at2759; -.
DR Proteomes; UP000246464; Chromosome 1.
DR Proteomes; UP000438429; Unassembled WGS sequence.
DR Proteomes; UP000694558; Chromosome 1.
DR Bgee; ENSSMAG00000000014; Expressed in muscle tissue and 6 other cell types or tissues.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR Gene3D; 1.20.5.170; -; 1.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR017903; COS_domain.
DR InterPro; IPR027370; Znf-RING_euk.
DR InterPro; IPR000315; Znf_B-box.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR InterPro; IPR017907; Znf_RING_CS.
DR PANTHER; PTHR24103; E3 UBIQUITIN-PROTEIN LIGASE TRIM; 1.
DR PANTHER; PTHR24103:SF673; TRIPARTITE MOTIF-CONTAINING PROTEIN 54-RELATED; 1.
DR Pfam; PF00643; zf-B_box; 1.
DR Pfam; PF13445; zf-RING_UBOX; 1.
DR SMART; SM00336; BBOX; 1.
DR SMART; SM00184; RING; 1.
DR SUPFAM; SSF57845; B-box zinc-binding domain; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS51262; COS; 1.
DR PROSITE; PS50119; ZF_BBOX; 1.
DR PROSITE; PS00518; ZF_RING_1; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000246464};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00024}.
FT DOMAIN 24..72
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT DOMAIN 118..160
FT /note="B box-type"
FT /evidence="ECO:0000259|PROSITE:PS50119"
FT DOMAIN 268..326
FT /note="COS"
FT /evidence="ECO:0000259|PROSITE:PS51262"
FT REGION 101..121
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 290..310
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 334 AA; 37923 MW; 88C911B097BE23A3 CRC64;
MDIQTSPVVR PLSAMENLEK QLSCPICLDM FTKPVVILPC QHNLCRGCAN DLYESKNPYH
YSGGTFRCPT CRFEVMLDRH GVFGLQRNLL VENIIDMYKQ QQESRGGGED PPLKDKDAKE
PKCKEHEDER INIYCVSCQT PTCSMCKVFG QHQDCEVSPL LAVYQSQKSE LCAAVEQLAA
GNGCVQAAVA QMDDTCKVLR DNGELQRRRL GESFDLLYAI MEERKAQLLE HIGREEQDKM
AALRALGERY KQQLQLSNQL QEKLQQNVQR CGAAEFLLAA KQLKEDVQQA ASGEELRRPE
PGYESMDHLS LDTEKVEALL ARVDFRRDSD EDQE
//
