ID A0A2U9CPF2_SCOMX Unreviewed; 1958 AA.
AC A0A2U9CPF2;
DT 12-SEP-2018, integrated into UniProtKB/TrEMBL.
DT 12-SEP-2018, sequence version 1.
DT 22-FEB-2023, entry version 15.
DE SubName: Full=Putative nucleosome-remodeling factor subunit BPTF-like isoform 2 {ECO:0000313|EMBL:AWP18514.1};
GN ORFNames=SMAX5B_006000 {ECO:0000313|EMBL:AWP18514.1};
OS Scophthalmus maximus (Turbot) (Psetta maxima).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Carangaria; Pleuronectiformes; Pleuronectoidei; Scophthalmidae;
OC Scophthalmus.
OX NCBI_TaxID=52904 {ECO:0000313|EMBL:AWP18514.1, ECO:0000313|Proteomes:UP000246464};
RN [1] {ECO:0000313|EMBL:AWP18514.1, ECO:0000313|Proteomes:UP000246464}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Martinez P.;
RT "Integrating genomic resources of turbot (Scophthalmus maximus) in depth
RT evaluation of genetic and physical mapping variation across individuals.";
RL Submitted (DEC-2017) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP026261; AWP18514.1; -; Genomic_DNA.
DR Proteomes; UP000246464; Chromosome 19.
DR GO; GO:0016589; C:NURF complex; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IEA:InterPro.
DR CDD; cd05509; Bromo_gcn5_like; 1.
DR CDD; cd15560; PHD2_3_BPTF; 2.
DR Gene3D; 1.20.920.10; Bromodomain-like; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 2.
DR InterPro; IPR038028; BPTF.
DR InterPro; IPR001487; Bromodomain.
DR InterPro; IPR036427; Bromodomain-like_sf.
DR InterPro; IPR018359; Bromodomain_CS.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR019787; Znf_PHD-finger.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR45975; NUCLEOSOME-REMODELING FACTOR SUBUNIT BPTF; 1.
DR PANTHER; PTHR45975:SF2; NUCLEOSOME-REMODELING FACTOR SUBUNIT BPTF; 1.
DR Pfam; PF00439; Bromodomain; 1.
DR Pfam; PF00628; PHD; 2.
DR PRINTS; PR00503; BROMODOMAIN.
DR SMART; SM00297; BROMO; 1.
DR SMART; SM00249; PHD; 2.
DR SUPFAM; SSF47370; Bromodomain; 1.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 2.
DR PROSITE; PS00633; BROMODOMAIN_1; 1.
DR PROSITE; PS50014; BROMODOMAIN_2; 1.
DR PROSITE; PS50016; ZF_PHD_2; 2.
PE 4: Predicted;
KW Bromodomain {ECO:0000256|ARBA:ARBA00023117, ECO:0000256|PROSITE-
KW ProRule:PRU00035}; Coiled coil {ECO:0000256|SAM:Coils};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000246464};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00146}.
FT DOMAIN 1727..1778
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS50016"
FT DOMAIN 1786..1837
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS50016"
FT DOMAIN 1863..1933
FT /note="Bromo"
FT /evidence="ECO:0000259|PROSITE:PS50014"
FT REGION 1..119
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 190..219
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 232..338
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 405..437
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 491..514
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 684..712
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 741..802
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 883..986
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1056..1082
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1102..1123
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1382..1407
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1426..1464
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1583..1722
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 1466..1534
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 14..28
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 29..46
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 47..96
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 190..205
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 232..248
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 249..288
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 289..318
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 319..338
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 741..765
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 767..802
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 883..937
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 971..986
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1056..1073
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1592..1620
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1622..1710
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1958 AA; 217021 MW; 2C024CCD51B35B8C CRC64;
MRKANGVNCT NNQKKLKETE KQNTADEDKE QASPIASAQS NLSDEDCKPQ NSKEEEKPTE
KDEEKEVEEK KEDEKMEVDP CPEASSEDKD KVDNEGPSLP TVESATEEPI QNVKQPKEEE
TAALKPYYDV VNVSEGFQLR TAYKKKVKPS KLDGLLERRV KQFTLEEKQR LERVRQTALQ
SKTAATKLNL GVKTEGSTSG KQQPAVTPGV KAEEKEESIQ LKDSVVKKLD FEQEAKADNV
DVESDSNHSK QTEVNAVQGN SGETSAQKEV NGGPLTNTEV NSRSNCISEA VENKEKTQKP
EVALAGENAK KRGYEEMEQG STQSDAESME VDQNKTSPVQ VNGQAVVSAT ADANIQGDTK
EPVKSLMNGD LSQKDASNTC HPPPLKVPKL ENHVAEKGDA LSKNVSVDSE GTVPAKLPSS
NASCVNSNSS DNGSGSEGLK TCITTKTTAA TADTSSTISK PDATSQTVRS AVSSVTIQPS
AQAPVAVVSQ KTRLSGTEAR KGTSGSTAGS SMTISKEYST RGRVSLLRFS KSRKARSGTA
LPSYRKFVTK SSKKSIFVLP NDDLKRLARR AGIREVPIFN YNAKPALDIW PYPSPRPTFG
ITWRYRLQTV RSLAGVSLML RLLWACLRWD DMAVKPSAAV GTTRKETTDT DITTTEIIKR
RDVGPYGIRS EYCIRKIICP LGIRDTPKET PTPQRKGLRS SALRPKKQEP AKLTGPIAVE
TWVAEEDLEL WEIRAFAERL EREKSQGGDP SKTLKTAEEK RLEQQRPGTP ATVSNTTAST
TSAGTPGTPS TPASTGQRTG QVTSGTKMVL ASKLGSPVSF QQDKNFHQSF ASWVKQGQTN
NSGSGVVQQK VLGIFPSGPP ANLRTYSTLH PTTGNINLRA STSGSTQQQA TTAGGQTQPC
ATMSQSSTLS TSVGTAMVRS PVTGQQGQPQ QAMSQMGRGQ PAAAAVPGST PVPTAVAPAP
SPHAATSAPG QAPAAPSQTN RPQQGQVKLT MAQLMQLTQG AQGNPGLTVV IQGQGQTQGQ
LQIIPQGVAV IPGPGQQLMQ AAMPNGQVQR FLFTPMPPSS SASTAAPSTA TPTKPAVPQT
PPTQMSALAQ ARTTAMVQTT PSALAQTQMA SPPQPQTSTQ LQPQPQAQIC AQIQVQPFGQ
VQQVPHIQAQ AHLQSKAQAQ IHPQVRVQFQ PHAPQAQVQP LAQIQPQVQF QSPNQNVTQV
QAPAQAQLQS RVQPPYHPQV QVSFQTQPQT QQHLQIQPQP LVQSQPQVQV QSPQQSQVQQ
QLQVQPQVQA KLQVQFQPQN QNQVQTQPQL QVQSPIRHQL ITVPGLQQPV QLLSALPPHV
AAQIQAQIQA QAQQQGGTVP QQIKLQLPIQ IQQTGGPIQA HQIQNMVTIQ AQASVQEQLQ
RMQQQQHQQQ HQLQQQPQQQ PQQQPQQQQQ QQQQQQQQQQ QQQQQQQQQQ QQPKKKKHHE
AKREEKEQNL QAVSPGDGVQ KQALVKQNAT AEQLKQRKTL AAAEREENQR MIVCNQVVKF
ILDKIEKDEK QAAKKRKKEE VVEQKRSKQN ATKLTALLYK HKEQLKAEIL KKRALLDKEL
QLQVQEELRR DIARLQKEKE KARAAITQAA AATVKAASSQ SSHPPHPTHS SHSTHTVTSP
SSSHKRKRDE ERDKDRSRDR DRHHDKDKKR DRDKDRDRLK DRDKDRDRDR ERERNKERDR
HRDRDKDKDK DRDRDKDKDK DEDTNSLKLK KKKKPSSTSK DHKKDTKLYC VCKTPYDESK
FYIGCDLCSN WFHGACVGIT EKEAKKLEDF VCNDCKRGQE GGSNEELYCI CRTPYDESQF
YIGCDRCQNW YHGRCVGILQ SEANHIDVYV CPQCQSTEDA MTVLTPLTDK DYEGLKRILR
SLQTHKMAWP FLEPVDPHDA PDYYRVIKEP MDFSTMETRL QKRHYHKLTE FVADVTKIFD
NCRYYNPNDT PFFQCAEQLE AFFVQKLKGF KASRLSDS
//
