ID A0A2V0NXD7_9CHLO Unreviewed; 579 AA.
AC A0A2V0NXD7;
DT 12-SEP-2018, integrated into UniProtKB/TrEMBL.
DT 12-SEP-2018, sequence version 1.
DT 27-MAR-2024, entry version 21.
DE RecName: Full=glycerophosphodiester phosphodiesterase {ECO:0000256|ARBA:ARBA00012247};
DE EC=3.1.4.46 {ECO:0000256|ARBA:ARBA00012247};
GN ORFNames=Rsub_02305 {ECO:0000313|EMBL:GBF89587.1};
OS Raphidocelis subcapitata.
OC Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Chlorophyceae;
OC CS clade; Sphaeropleales; Selenastraceae; Raphidocelis.
OX NCBI_TaxID=307507 {ECO:0000313|EMBL:GBF89587.1, ECO:0000313|Proteomes:UP000247498};
RN [1] {ECO:0000313|EMBL:GBF89587.1, ECO:0000313|Proteomes:UP000247498}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NIES-35 {ECO:0000313|EMBL:GBF89587.1,
RC ECO:0000313|Proteomes:UP000247498};
RX PubMed=29795299; DOI=10.1038/s41598-018-26331-6;
RA Suzuki S., Yamaguchi H., Nakajima N., Kawachi M.;
RT "Raphidocelis subcapitata (=Pseudokirchneriella subcapitata) provides an
RT insight into genome evolution and environmental adaptations in the
RT Sphaeropleales.";
RL Sci. Rep. 8:8058-8058(2018).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a sn-glycero-3-phosphodiester + H2O = an alcohol + H(+) + sn-
CC glycerol 3-phosphate; Xref=Rhea:RHEA:12969, ChEBI:CHEBI:15377,
CC ChEBI:CHEBI:15378, ChEBI:CHEBI:30879, ChEBI:CHEBI:57597,
CC ChEBI:CHEBI:83408; EC=3.1.4.46;
CC Evidence={ECO:0000256|ARBA:ARBA00029315};
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GBF89587.1}.
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DR EMBL; BDRX01000011; GBF89587.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2V0NXD7; -.
DR STRING; 307507.A0A2V0NXD7; -.
DR InParanoid; A0A2V0NXD7; -.
DR Proteomes; UP000247498; Unassembled WGS sequence.
DR GO; GO:0008889; F:glycerophosphodiester phosphodiesterase activity; IEA:UniProtKB-EC.
DR GO; GO:0006071; P:glycerol metabolic process; IEA:UniProtKB-KW.
DR GO; GO:0006629; P:lipid metabolic process; IEA:InterPro.
DR Gene3D; 3.20.20.190; Phosphatidylinositol (PI) phosphodiesterase; 1.
DR InterPro; IPR030395; GP_PDE_dom.
DR InterPro; IPR017946; PLC-like_Pdiesterase_TIM-brl.
DR PANTHER; PTHR43620:SF7; GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPD6; 1.
DR PANTHER; PTHR43620; GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE; 1.
DR Pfam; PF03009; GDPD; 1.
DR SUPFAM; SSF51695; PLC-like phosphodiesterases; 2.
DR PROSITE; PS51704; GP_PDE; 1.
PE 4: Predicted;
KW Glycerol metabolism {ECO:0000256|ARBA:ARBA00022798};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Reference proteome {ECO:0000313|Proteomes:UP000247498};
KW Signal {ECO:0000256|ARBA:ARBA00022729, ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..17
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 18..579
FT /note="glycerophosphodiester phosphodiesterase"
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5015938611"
FT DOMAIN 80..216
FT /note="GP-PDE"
FT /evidence="ECO:0000259|PROSITE:PS51704"
FT REGION 26..78
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 251..278
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 350..393
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 49..70
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 579 AA; 57232 MW; 275B815C4808AF1F CRC64;
MASRASWLAL LLLAAAAGPR PGLTAAPRAH LGPRGWLRDA APGAAAPTTT LPPLYPSPPP
PPPPASQQSP AAPAPRRRRP VVIAHRGASG ALPEHTAAAY EAAIAAGADF IECDVQLTAD
LHMICRHEQN LNETTDALEV FPGRARALWI DGEPSRGVHA ADLTLAELRR LRARQRFAFR
DQSHNGRYPL VTFEEFLDIA DAAPRGVGVY PELKHPAWHN ALPQMRAAGA TLEAMVVAAL
HARGYGAAAP ANSGGGGGGD GGSLLSSGGG GGGGDGSSGG RPAFIQSFEL SSLRRAAALT
RIPLVLLLGG WPGYVAPDSG LTHAEMTTPD FLADAAAVVA GAGPWKGSLW AAKEPVGGGG
GEGGGSGSSS GGEEDGGSSG GGEEGSSVGA SASVGGASAA AGLSPDAAHD ASLPAAAGLA
SSSLASRLRA AGLLVHPYTL RDEPSFVPAA FGGDVRGELS ALFESEGVDG VFADYPGTAV
AWLEARAAAA EAAAAYEAAA PEAEGGAFEA EGRAAAAAGA AARNGSGAGS GAGAAGPARA
AAASVAGWDA AGAAAAAPRP AVGWGRPLFL DFSATEPEF
//
