ID A0A2V0P256_9CHLO Unreviewed; 853 AA.
AC A0A2V0P256;
DT 12-SEP-2018, integrated into UniProtKB/TrEMBL.
DT 12-SEP-2018, sequence version 1.
DT 27-MAR-2024, entry version 21.
DE RecName: Full=DNA polymerase kappa {ECO:0000256|ARBA:ARBA00016178};
GN ORFNames=Rsub_06207 {ECO:0000313|EMBL:GBF93958.1};
OS Raphidocelis subcapitata.
OC Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Chlorophyceae;
OC CS clade; Sphaeropleales; Selenastraceae; Raphidocelis.
OX NCBI_TaxID=307507 {ECO:0000313|EMBL:GBF93958.1, ECO:0000313|Proteomes:UP000247498};
RN [1] {ECO:0000313|EMBL:GBF93958.1, ECO:0000313|Proteomes:UP000247498}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NIES-35 {ECO:0000313|EMBL:GBF93958.1,
RC ECO:0000313|Proteomes:UP000247498};
RX PubMed=29795299; DOI=10.1038/s41598-018-26331-6;
RA Suzuki S., Yamaguchi H., Nakajima N., Kawachi M.;
RT "Raphidocelis subcapitata (=Pseudokirchneriella subcapitata) provides an
RT insight into genome evolution and environmental adaptations in the
RT Sphaeropleales.";
RL Sci. Rep. 8:8058-8058(2018).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GBF93958.1}.
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DR EMBL; BDRX01000046; GBF93958.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2V0P256; -.
DR STRING; 307507.A0A2V0P256; -.
DR InParanoid; A0A2V0P256; -.
DR Proteomes; UP000247498; Unassembled WGS sequence.
DR GO; GO:0003684; F:damaged DNA binding; IEA:InterPro.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:InterPro.
DR GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR CDD; cd03586; PolY_Pol_IV_kappa; 1.
DR Gene3D; 1.10.150.810; -; 1.
DR Gene3D; 3.30.70.270; -; 2.
DR Gene3D; 3.40.1170.60; -; 1.
DR Gene3D; 1.10.150.20; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR Gene3D; 3.30.1490.100; DNA polymerase, Y-family, little finger domain; 1.
DR HAMAP; MF_01113; DNApol_IV; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR036775; DNA_pol_Y-fam_lit_finger_sf.
DR InterPro; IPR017961; DNA_pol_Y-fam_little_finger.
DR InterPro; IPR022880; DNApol_IV.
DR InterPro; IPR024728; PolY_HhH_motif.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR001126; UmuC.
DR PANTHER; PTHR11076:SF33; DNA POLYMERASE KAPPA; 1.
DR PANTHER; PTHR11076; DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBER; 1.
DR Pfam; PF00817; IMS; 1.
DR Pfam; PF11799; IMS_C; 1.
DR Pfam; PF11798; IMS_HHH; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF100879; Lesion bypass DNA polymerase (Y-family), little finger domain; 1.
DR PROSITE; PS50173; UMUC; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000247498}.
FT DOMAIN 190..371
FT /note="UmuC"
FT /evidence="ECO:0000259|PROSITE:PS50173"
FT REGION 1..101
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 546..642
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 692..745
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 805..853
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 80..98
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 692..718
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 853 AA; 86916 MW; 503C8F3C6287342A CRC64;
MEGSGVPLPA APAAAPAASS GGGGSGQRAE HAAAAPAAAA PSRSPSPLPS PRGGHGWFRQ
PRGGSGGGGA GSGPSASPPA AAAAPRPPQP PPQPPPGREA WRDYSSVFTA AKAGMGGVDR
DHVKKTVYEL SKDSAHFKNE QRKQSAVDEK IAQLRARAAR LPASDLAARA RASDARVAAL
EAGRDLGRAW LHVDMDAFYA AVEERDCPAL KEVPMAVGGM GMITTANYKA RPYGVRSAMP
GFIARALCPA LVFVAPRFEK YVAASGEVRA VLRRYDPHFR AASLDEAYLD VTDYCEAHGV
TSEQVATELR AAVQQETRGL TCSVGAAPNQ LLAKVASDIN KPDGQYVVPP SRAAVLEFVR
TLPIRKVPGI GKVSEQLLSS LGVSTCGELN EKRGLVAALF TPAAAEFFLE ASLGLGATRH
AEAAPDGEPA RKGISCERTF RPISDPKQLR EMLSSLAEHL ATDMAEEGIE GRTVGLKLKA
TTFEVLTRAV TLPRHASAAA DMLPALNKLL QAELPIEARL MGVRMSNLRK KGGGGGGAPN
ALQRLLAMGA GGGGGGGGGG GGGGGGEQHQ QQQQQQQQQQ EEEGEEEGEQ GAAHAPALPG
SEAAGADGGE CDAEAGRTLA AASPPPSPSP SPQPAAKRAR VGASAAAGAA PGRGGGFWAC
GACTYSENGA WSLRCDVCGT LKGGALSFEL ERQQREESRQ KREQRRRRSR RAEEQAQERT
DLAGAAGSPP PPAPSSPAAA AQPADAYAAG GASDVHSGAA AARRECRECG ALVAAADWVA
HCDGHLAAKL QREEEAAAAA AAAAAAAGAA AGRPAPAPAP RGRARGGAAG GRGGAGGAPP
ARPTALDRFL GRG
//
