ID A0A2V0P6B3_9CHLO Unreviewed; 471 AA.
AC A0A2V0P6B3;
DT 12-SEP-2018, integrated into UniProtKB/TrEMBL.
DT 12-SEP-2018, sequence version 1.
DT 28-JUN-2023, entry version 17.
DE RecName: Full=UBX domain-containing protein {ECO:0000259|PROSITE:PS50033};
GN ORFNames=Rsub_05239 {ECO:0000313|EMBL:GBF92625.1};
OS Raphidocelis subcapitata.
OC Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Chlorophyceae;
OC CS clade; Sphaeropleales; Selenastraceae; Raphidocelis.
OX NCBI_TaxID=307507 {ECO:0000313|EMBL:GBF92625.1, ECO:0000313|Proteomes:UP000247498};
RN [1] {ECO:0000313|EMBL:GBF92625.1, ECO:0000313|Proteomes:UP000247498}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NIES-35 {ECO:0000313|EMBL:GBF92625.1,
RC ECO:0000313|Proteomes:UP000247498};
RX PubMed=29795299; DOI=10.1038/s41598-018-26331-6;
RA Suzuki S., Yamaguchi H., Nakajima N., Kawachi M.;
RT "Raphidocelis subcapitata (=Pseudokirchneriella subcapitata) provides an
RT insight into genome evolution and environmental adaptations in the
RT Sphaeropleales.";
RL Sci. Rep. 8:8058-8058(2018).
CC -!- SIMILARITY: Belongs to the UFD1 family.
CC {ECO:0000256|ARBA:ARBA00006043}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GBF92625.1}.
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DR EMBL; BDRX01000033; GBF92625.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2V0P6B3; -.
DR STRING; 307507.A0A2V0P6B3; -.
DR InParanoid; A0A2V0P6B3; -.
DR Proteomes; UP000247498; Unassembled WGS sequence.
DR GO; GO:0050896; P:response to stimulus; IEA:UniProt.
DR GO; GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:InterPro.
DR CDD; cd01767; UBX; 1.
DR Gene3D; 3.10.330.10; -; 1.
DR Gene3D; 2.40.40.50; Ubiquitin fusion degradation protein UFD1, N-terminal domain; 1.
DR InterPro; IPR029071; Ubiquitin-like_domsf.
DR InterPro; IPR001012; UBX_dom.
DR InterPro; IPR004854; Ufd1-like.
DR InterPro; IPR042299; Ufd1-like_Nn.
DR PANTHER; PTHR12555; UBIQUITIN FUSION DEGRADATON PROTEIN 1; 1.
DR PANTHER; PTHR12555:SF13; UBIQUITIN RECOGNITION FACTOR IN ER-ASSOCIATED DEGRADATION PROTEIN 1; 1.
DR Pfam; PF00789; UBX; 1.
DR Pfam; PF03152; UFD1; 1.
DR SMART; SM00166; UBX; 1.
DR SUPFAM; SSF54236; Ubiquitin-like; 1.
DR PROSITE; PS50033; UBX; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000247498};
KW Ubl conjugation pathway {ECO:0000256|ARBA:ARBA00022786}.
FT DOMAIN 373..431
FT /note="UBX"
FT /evidence="ECO:0000259|PROSITE:PS50033"
FT REGION 1..51
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 168..203
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 306..360
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 8..51
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 471 AA; 49904 MW; AF85EF516E27459F CRC64;
MFNGELKARA SKLEREVKER SEAERRRREK ERLLEERQAA RQRAREEEQR ERRLALLAAE
QAERERREAE TEANRGVYYR AQLRAAPTSA AAASARGIRR AVDKLVLPAS VGALLMAQEA
FKNGAMLFEV SASNGARTHA GVLEFSSEVA EGVVLLPEKV QDSLWGLATP ALPPADAPGG
GDGGGGAGPG PGSDGGEPVG SGGGRCAGKV HVAYKRLEKG TYVRLQPETR AFHDVVGSDP
EQMRAALEDA LHAVCALTEG DWVQVPFGGE TYALRVLELQ PDPAVSVIDT DIACDVGPSI
ETEGYLRARE EELAREQERQ RQLQEEREAL ALQALAAAEA QQAEEQQRAA EDAARRLRIA
AAAAAALPPE PGTSQPHATC AVRLPGGERL QRRFGPSDPV AALFDWVDSN GAGGMWPGEY
RLVSAYPRRV FEPPAAKAGA GGGGGGGGTL EAAGLVAGEQ VALLLEGLGG G
//
