ID A0A2V0PPI0_9CHLO Unreviewed; 894 AA.
AC A0A2V0PPI0;
DT 12-SEP-2018, integrated into UniProtKB/TrEMBL.
DT 12-SEP-2018, sequence version 1.
DT 24-JAN-2024, entry version 24.
DE SubName: Full=DNA mismatch repair protein {ECO:0000313|EMBL:GBF99950.1};
GN ORFNames=Rsub_12643 {ECO:0000313|EMBL:GBF99950.1};
OS Raphidocelis subcapitata.
OC Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Chlorophyceae;
OC CS clade; Sphaeropleales; Selenastraceae; Raphidocelis.
OX NCBI_TaxID=307507 {ECO:0000313|EMBL:GBF99950.1, ECO:0000313|Proteomes:UP000247498};
RN [1] {ECO:0000313|EMBL:GBF99950.1, ECO:0000313|Proteomes:UP000247498}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NIES-35 {ECO:0000313|EMBL:GBF99950.1,
RC ECO:0000313|Proteomes:UP000247498};
RX PubMed=29795299; DOI=10.1038/s41598-018-26331-6;
RA Suzuki S., Yamaguchi H., Nakajima N., Kawachi M.;
RT "Raphidocelis subcapitata (=Pseudokirchneriella subcapitata) provides an
RT insight into genome evolution and environmental adaptations in the
RT Sphaeropleales.";
RL Sci. Rep. 8:8058-8058(2018).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the DNA mismatch repair MutL/HexB family.
CC {ECO:0000256|ARBA:ARBA00006082}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GBF99950.1}.
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DR EMBL; BDRX01000182; GBF99950.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2V0PPI0; -.
DR STRING; 307507.A0A2V0PPI0; -.
DR InParanoid; A0A2V0PPI0; -.
DR Proteomes; UP000247498; Unassembled WGS sequence.
DR GO; GO:0032300; C:mismatch repair complex; IEA:InterPro.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0140664; F:ATP-dependent DNA damage sensor activity; IEA:InterPro.
DR GO; GO:0030983; F:mismatched DNA binding; IEA:InterPro.
DR GO; GO:0006298; P:mismatch repair; IEA:InterPro.
DR CDD; cd16926; HATPase_MutL-MLH-PMS-like; 1.
DR Gene3D; 3.30.230.10; -; 1.
DR Gene3D; 3.30.565.10; Histidine kinase-like ATPase, C-terminal domain; 1.
DR InterPro; IPR014762; DNA_mismatch_repair_CS.
DR InterPro; IPR013507; DNA_mismatch_S5_2-like.
DR InterPro; IPR036890; HATPase_C_sf.
DR InterPro; IPR032189; Mlh1_C.
DR InterPro; IPR002099; MutL/Mlh/PMS.
DR InterPro; IPR038973; MutL/Mlh/Pms-like.
DR InterPro; IPR020568; Ribosomal_Su5_D2-typ_SF.
DR InterPro; IPR014721; Ribsml_uS5_D2-typ_fold_subgr.
DR NCBIfam; TIGR00585; mutl; 1.
DR PANTHER; PTHR10073; DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL; 1.
DR PANTHER; PTHR10073:SF12; DNA MISMATCH REPAIR PROTEIN MLH1; 1.
DR Pfam; PF01119; DNA_mis_repair; 1.
DR Pfam; PF13589; HATPase_c_3; 1.
DR Pfam; PF16413; Mlh1_C; 1.
DR SMART; SM01340; DNA_mis_repair; 1.
DR SUPFAM; SSF55874; ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase; 1.
DR SUPFAM; SSF54211; Ribosomal protein S5 domain 2-like; 1.
DR PROSITE; PS00058; DNA_MISMATCH_REPAIR_1; 1.
PE 3: Inferred from homology;
KW DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000247498}.
FT DOMAIN 259..391
FT /note="DNA mismatch repair protein S5"
FT /evidence="ECO:0000259|SMART:SM01340"
FT REGION 1..35
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 419..455
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 478..502
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 545..591
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 792..837
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 419..444
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 894 AA; 91471 MW; 5FC0EC415C25556C CRC64;
MSAAGTAGAA GGGGSGSGDA APASAAAAAP AAPPAPAPIR QLPEAVVHRI AAGEVIQRPA
SALKEMLENS IDAGASRVSV TVKEGGLRLL QVADDGSGVA RSDLPLLCVR HATSKLRAYE
DLETIATLGF RGEALASISF VAHLSVTTMT RGAQHAWRAS YQDGALLDPP GAKPCAGVPG
TVLTVEDLFF NVPTRRKAFR AGGSEEGALI LDLLQARVFG GGTRYAVWAA PRVGFTLRRQ
GESRADLATS PGASRLDVVR AIHGPDLAAC LLPLAVSRGL EPTADLPADA PGGPHLRAEG
FVTSLAWTGR RGALVLFING RCVECGPLKR GAEAVYASLL PKGPKPWMFL DVALPPRQVE
VNVHPTKREV GFLGQDEIVD AICRELEATL LAAMSSRTFA TEAPPTAAAT SLRLAEQIAR
QPSGSGQQQQ RQQQQQQGAS QQPQKPAAPP AYRPDKLVRA DHRTRTMDAF VVRGGAAARA
GGGDISGGDA GGGAAAEGEQ RAAGELPASA AALAAVGGGV PRKRRAAEHD RLNFSSSMVA
AGQAAAAGAA AEEGDPHDGA EEGRAGPAPG ASKPPLPGGV PRAVRPRPNQ AALTRVPAAR
ALLAAREAST HEALWALVRQ HVFVGLADEA GEWALLQHGT RLYLLAAGPL TADLFEQQLL
RRWGCCPAVA LAEPLGLREV AEAGLELEAA AGRWQPTDGP IPELAGLVAA ILVTRAPLLA
QAGITFDADG RLASLPALLE GYAPDLARLP GLVLALARDV DWEAGEDAAI AGVAAAVAKF
YALQPLEAAL DSSGGGGDGG EGGSGAEPMD VDGDGSGGRG GSAAPSSTST AAPSAAGDEL
AAHRSLAGRE WAARHVVFPA VKALLRPQAA RVKDGSVLLL TSMERLYRTF ERCG
//