ID A0A2V1CGU6_9HELO Unreviewed; 2009 AA.
AC A0A2V1CGU6;
DT 12-SEP-2018, integrated into UniProtKB/TrEMBL.
DT 12-SEP-2018, sequence version 1.
DT 27-MAR-2024, entry version 21.
DE RecName: Full=tRNA-splicing endonuclease-like protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=DL98DRAFT_527864 {ECO:0000313|EMBL:PVH84906.1};
OS Cadophora sp. DSE1049.
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes;
OC Helotiales; Helotiales incertae sedis; Cadophora.
OX NCBI_TaxID=1485229 {ECO:0000313|EMBL:PVH84906.1, ECO:0000313|Proteomes:UP000244409};
RN [1] {ECO:0000313|EMBL:PVH84906.1, ECO:0000313|Proteomes:UP000244409}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSE1049 {ECO:0000313|EMBL:PVH84906.1,
RC ECO:0000313|Proteomes:UP000244409};
RX PubMed=29679020; DOI=10.1038/s41598-018-24686-4;
RA Knapp D.G., Nemeth J.B., Barry K., Hainaut M., Henrissat B., Johnson J.,
RA Kuo A., Lim J.H.P., Lipzen A., Nolan M., Ohm R.A., Tamas L.,
RA Grigoriev I.V., Spatafora J.W., Nagy L.G., Kovacs G.M.;
RT "Comparative genomics provides insights into the lifestyle and reveals
RT functional heterogeneity of dark septate endophytic fungi.";
RL Sci. Rep. 8:6321-6321(2018).
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DR EMBL; KZ804121; PVH84906.1; -; Genomic_DNA.
DR STRING; 1485229.A0A2V1CGU6; -.
DR Proteomes; UP000244409; Unassembled WGS sequence.
DR GO; GO:0004386; F:helicase activity; IEA:InterPro.
DR CDD; cd18042; DEXXQc_SETX; 1.
DR CDD; cd18808; SF1_C_Upf1; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR045055; DNA2/NAM7-like.
DR InterPro; IPR041679; DNA2/NAM7-like_C.
DR InterPro; IPR041677; DNA2/NAM7_AAA_11.
DR InterPro; IPR024481; Helicase_Sen1_N.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR047187; SF1_C_Upf1.
DR PANTHER; PTHR10887; DNA2/NAM7 HELICASE FAMILY; 1.
DR PANTHER; PTHR10887:SF525; HELICASE SENATAXIN-RELATED; 1.
DR Pfam; PF13086; AAA_11; 1.
DR Pfam; PF13087; AAA_12; 1.
DR Pfam; PF12726; SEN1_N; 1.
DR SUPFAM; SSF48371; ARM repeat; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000244409}.
FT DOMAIN 92..827
FT /note="Helicase Sen1 N-terminal"
FT /evidence="ECO:0000259|Pfam:PF12726"
FT DOMAIN 1296..1590
FT /note="DNA2/NAM7 helicase helicase"
FT /evidence="ECO:0000259|Pfam:PF13086"
FT DOMAIN 1597..1793
FT /note="DNA2/NAM7 helicase-like C-terminal"
FT /evidence="ECO:0000259|Pfam:PF13087"
FT REGION 28..53
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 903..931
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1016..1049
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1823..2009
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1032..1049
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1846..1866
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1928..1946
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1976..1996
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 2009 AA; 226106 MW; 309BD86C7352931E CRC64;
MREEELWDQL QELDGELKSF PPAAHWFCPK RSDDDNVDYD QPNEPEEGMS QETKNELIQD
FRKRYKVAYR YSQILGLNEE ITGKAREDYS AALDHVLKLC DKCVFNWHLG RKEHLKWLSE
QYDDEVVAEL ANRINSLDFQ RIDKGLKSGE ELLRAVEPQR RSQSYLAKQD TAALMAIYES
LCCADYHRDD SRLSKHFDYV FEQVQHRKVL RLGDMLPAMA RFLFSRNYYR YRFAANCWEK
MTDKLTAKTF DWVVNDNLAQ AIVHVANLSV SPEDIIGFWK AFLFMLEKMD QDLVTHRLRG
MEVQPDIYRL ALQHLAASSG TIVQLVINAL SRLLTKAPKV FWSAMETISP GAVIDCIFQS
PGFERLLMNA EFFEKIAESP PISWVPGFLK SIGTDHRYDA CRSLLRHLLE RFQSDRYPDY
TRLACCAAGM GALNLTLETF VSSEYKINPS TSLIVISELM GLVNKHRNMV DGCADLEDGN
ITAAQKILRT VGMSVIKNAL TLDCKSVRAE FDNLLHDQPV QRGLRSHSQP IWQGVLDIFR
PGNIELAKSI IPATSVLAGL DRFHPKDRKK AELMTKDRVQ FNKDLDELMD NISRIIDRLS
DFSSLDLAQF SQDSTMIQPL VATLLSCDQR VCEATVGAIK AMTGEDIRQD ALQNLLETSF
SPMLASINST VKEVTRVRTF GPVPYMIKIN GEVLTGLAGN TGVLRARSSF SKYDRYLIKD
WWHSQWRALH VAFESTEVWS PSVNKNTAEM QDFCRAVMEY AEALFDEYTV FASALKSSTP
SPNGQEDIER HLSSRESIRE ILAIVGNNIN GMVTWLRLRD GYLVSIITKL LGKLLHALGD
YNVDVHDFAD KYIRNACTSD GSVRTNMTMQ QKAELQRALD DLHGFSEIVE VSKVSSIPRT
QASLDSWSRS AGGMQHEPRL PPRSEKKSAV KNGRVSTFQP LSKVKADTTM SAEAQETFRE
NRRKMQEERE RQKAEAIAKA RAIRAPATIR GEGSGLKGIG GVAGKDHAPI RSEIMVGSSD
EDSDDDDDED ETNALVKRRK ETSKVVSEYE ESRRRALKQM NQGPVKKTKV QRSAKDLRAR
VEPNMDPLYE EILSWDIFHD SDTPPSSTIC RKIDNKYLNL DLYRSTFAPL LISEVWRSLV
TARDENNYKP IEIKVLNRMS VDKFMEVSTS MPMSKNRDLM VSERDIVLLS QTTDPISNPS
APHCLARVQR TTRKKDALEV TYSISRGTVA VLLNSFVPNG KVYAVKIADM TTTQREFAAL
SALMYYDLCS EILEAKPSPI QKYSDEKIST YASTYKLNKG QARAILSASE NDGFTLIQGP
PGSGKTKTIV AMVGCLLTQT LKEQASHMVQ HKPAAQGQPA AKAPMKKKLL ICAPSNAAVD
ELVVRLMEGV QPLNGPRQKI NVIRIGRSDA INAAVKEVML DELVQKKLEG SDGEKNKLLN
ERENLHKDAA LIKERLNVIR PLMDEAHKLN DTKKERDLRR EFDDLKRKQA SIGAKIDEDK
QSGNTYTRQN EINRRRFQQE IIDGAHVLCS TLSSSGHDMF RNIDVEFETV IIDEAAQCIE
LSALIPLKYG ATKCILVGDP EQLPPTVLSR SAQSFGYEQS LFVRMQKNHP KDVHLLDTQY
RMHPEISSFP SEQFYNSRLI DGPDMDKLRE QPWHASTILG PYRFFDVEGV QTKHAQGHSF
INVPELNAAL ALYARLKNDY RNVDFKGKIG IITSYKAQLT EMKARFARQY GDDIFEEIEF
NTTDAFQGRE REIIIFSCVR AKATGGIGFL GDIRRMNVGL TRAKSSLWVL GDSRSLQQGQ
FWNRLIEDAK ARKRYTSGNV MELFSKPTSR GGQPAWQPRQ PPPSENRPSS SNGTRPSLSN
NDPIASRPKT EVVDNDIEMT DAPSLPSSRK VSLAGVGGHA AVSGSKPQGA LGIRSGVRKP
TGSTLDGSHS KRPRESDVKD EQGQGPSKKA HPTPPPGTET SALEAALQAQ QAKKPPPTSR
PRPPGLVPPP RRPKPAADPF IQRKPPKRN
//