ID A0A2V1CMD2_9HELO Unreviewed; 693 AA.
AC A0A2V1CMD2;
DT 12-SEP-2018, integrated into UniProtKB/TrEMBL.
DT 12-SEP-2018, sequence version 1.
DT 27-MAR-2024, entry version 17.
DE RecName: Full=PHD-type domain-containing protein {ECO:0000259|PROSITE:PS50016};
DE Flags: Fragment;
GN ORFNames=DL98DRAFT_406417 {ECO:0000313|EMBL:PVH86796.1};
OS Cadophora sp. DSE1049.
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes;
OC Helotiales; Helotiales incertae sedis; Cadophora.
OX NCBI_TaxID=1485229 {ECO:0000313|EMBL:PVH86796.1, ECO:0000313|Proteomes:UP000244409};
RN [1] {ECO:0000313|EMBL:PVH86796.1, ECO:0000313|Proteomes:UP000244409}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSE1049 {ECO:0000313|EMBL:PVH86796.1,
RC ECO:0000313|Proteomes:UP000244409};
RX PubMed=29679020; DOI=10.1038/s41598-018-24686-4;
RA Knapp D.G., Nemeth J.B., Barry K., Hainaut M., Henrissat B., Johnson J.,
RA Kuo A., Lim J.H.P., Lipzen A., Nolan M., Ohm R.A., Tamas L.,
RA Grigoriev I.V., Spatafora J.W., Nagy L.G., Kovacs G.M.;
RT "Comparative genomics provides insights into the lifestyle and reveals
RT functional heterogeneity of dark septate endophytic fungi.";
RL Sci. Rep. 8:6321-6321(2018).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; KZ804114; PVH86796.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2V1CMD2; -.
DR STRING; 1485229.A0A2V1CMD2; -.
DR Proteomes; UP000244409; Unassembled WGS sequence.
DR GO; GO:0048188; C:Set1C/COMPASS complex; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR037869; Spp1/CFP1.
DR InterPro; IPR019786; Zinc_finger_PHD-type_CS.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR019787; Znf_PHD-finger.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR46174; CXXC-TYPE ZINC FINGER PROTEIN 1; 1.
DR PANTHER; PTHR46174:SF1; CXXC-TYPE ZINC FINGER PROTEIN 1; 1.
DR Pfam; PF20826; PHD_5; 1.
DR SMART; SM00249; PHD; 1.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 1.
DR PROSITE; PS01359; ZF_PHD_1; 1.
DR PROSITE; PS50016; ZF_PHD_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000244409};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00146}.
FT DOMAIN 613..661
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS50016"
FT REGION 28..47
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 64..166
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 325..614
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 82..102
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 141..166
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 339..369
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 387..415
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 416..450
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 480..526
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 551..576
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 577..614
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:PVH86796.1"
SQ SEQUENCE 693 AA; 76027 MW; 3399239B7FA52718 CRC64;
NRGGWTPTFA EEYSVFNATP GRLTSAQQHF VETSTPRPST ASTQNRPLSE GDFAAELATH
VHHLSPNPNL SLPPVDPSNQ LPSSPGPYSA TQSHFDDNTN NQVTPRKPRK RLEEAFSGQT
ATPPATKSKG SRKLAPKLAT DTMQNEAQDS HYGASQTPTH QQNLMSFPSS SSEFFYPMSA
PATAPVFTNT KPFWDPDASM GGMDLDFSTD DPSMFNMGSH RMSNSFDWGR SNQMFQETAN
VPTPSPNIAT EGEQNTIKRQ RPLAPKLPAS TTELLPSTMA PFDFNNVSAS EDPFSPPALG
GVDPGLLFSR NNPIPMPSEF QDVHLPPTRP VTSHVELKPY QHQLRESMRD QEEMRRSRGS
RESSRSRRFE RGTASSPVKG SARPGLQRIL SRTSTGRISP VKHQRPSNLM SIPETERPRT
RTEVKFTIDA NGRARTETVL VEEDPRTSRG GPSARSEGWE SSQYDESSSD DEPILVPSRN
ASFSLPQQKP PKMGNFDTSG RTHAIQRGSS GGYSQSESSS QRSFRRDSLG SEAETVMDED
DGSGDAAQAL RKVMESRKKG QVKPRNPQHH RYSDSTPRRN SQYGNYSSST NMSPTTITDP
DGGATPSSTK SGTTRCVCGN SDSEGLMILC ESCDNWLHAD CVGIDHRSLP PVYVCAFCAQ
TPNLRGGRIR EPAKGVSRMG LSPLAHKSFK SFR
//
