ID A0A2V1IM55_9BACT Unreviewed; 712 AA.
AC A0A2V1IM55;
DT 12-SEP-2018, integrated into UniProtKB/TrEMBL.
DT 12-SEP-2018, sequence version 1.
DT 24-JAN-2024, entry version 12.
DE SubName: Full=RNA-binding transcriptional accessory protein {ECO:0000313|EMBL:PWB00851.1};
GN ORFNames=C5O23_11530 {ECO:0000313|EMBL:PWB00851.1};
OS Duncaniella muris.
OC Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae;
OC Duncaniella.
OX NCBI_TaxID=2094150 {ECO:0000313|EMBL:PWB00851.1, ECO:0000313|Proteomes:UP000244905};
RN [1] {ECO:0000313|Proteomes:UP000244905}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 103720 {ECO:0000313|Proteomes:UP000244905};
RA Clavel T., Strowig T.;
RL Submitted (FEB-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PWB00851.1}.
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DR EMBL; PUEC01000030; PWB00851.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2V1IM55; -.
DR Proteomes; UP000244905; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR CDD; cd05685; S1_Tex; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 1.10.10.650; RuvA domain 2-like; 1.
DR Gene3D; 1.10.3500.10; Tex N-terminal region-like; 1.
DR Gene3D; 1.10.150.310; Tex RuvX-like domain-like; 1.
DR Gene3D; 3.30.420.140; YqgF/RNase H-like domain; 1.
DR InterPro; IPR041692; HHH_9.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR010994; RuvA_2-like.
DR InterPro; IPR003029; S1_domain.
DR InterPro; IPR044146; S1_Tex.
DR InterPro; IPR023323; Tex-like_dom_sf.
DR InterPro; IPR023319; Tex-like_HTH_dom_sf.
DR InterPro; IPR018974; Tex-like_N.
DR InterPro; IPR032639; Tex_YqgF.
DR InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF10; S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1; 1.
DR Pfam; PF12836; HHH_3; 1.
DR Pfam; PF17674; HHH_9; 1.
DR Pfam; PF00575; S1; 1.
DR Pfam; PF09371; Tex_N; 1.
DR Pfam; PF16921; Tex_YqgF; 1.
DR SMART; SM00316; S1; 1.
DR SMART; SM00732; YqgFc; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR SUPFAM; SSF47781; RuvA domain 2-like; 2.
DR SUPFAM; SSF158832; Tex N-terminal region-like; 1.
DR PROSITE; PS50126; S1; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000244905}.
FT DOMAIN 639..708
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
SQ SEQUENCE 712 AA; 79090 MW; 1719FB93CF8EEC66 CRC64;
MANVHANVIT AELGTHLRKH VAACLRLLDE GATIPFIARY RKEATGGMDE VTVHAVQKRH
QELSELDKRK EYILDVIRER GALTAELEER INETLDPVAL EDIYLPYKPK RNTRAQAARA
LGLEPLAKII MAQNSTDVEK QAKKFAKEAG SISAALAGAS DIIAEWVSES EKARNLVRSR
YQRSAVINSK VIAGKEDEGK NYQNYFNFSE PLRTCNSHRY LAMRRGEEEE ILKVSITIDD
DEMIDRLSRM FVRSGASEEC ASLVRGAVKD GYRRLMRPSI ENEVAAATKE KSDDAAIQMF
ADNVRQLLMA APLGRKRVLA IDPGFRTGCK LVVLDEQGNL LQHDVIYPTP PANDFVGAAD
ALCFYVDRYR IDAIAIGNGT AGRETERFIR DVMLPRKVQL FMVNENGASV YSASEVAREE
FPNEDVTVRG AVSIGRRLID PLAELVKIDP KSIGVGQYQH AVNQTKLKDS LDYVVESCVN
TVGVNVNTAS RQLLSYVSGI GPSLAANIVK YRAENGDFTS RDQLLQVPRM GEKAFQQCAG
FLRIPGAPNP LDNTGVHPER YELVEQIAFD AKADVARLAR DRNLLHSIEL DRYVTKEVGL
PTLTDIILEL EKPGRDPRET VEETPYDDSV RTIDDLHIGQ ELTGKVNNIT AFGVFVDLGM
KENGLIHISQ LSERFISSPS EVVSIGQNVR VRVMDIDTSR GRIALTMKGV AQ
//
