ID A0A2V1IW60_9BACT Unreviewed; 1190 AA.
AC A0A2V1IW60;
DT 12-SEP-2018, integrated into UniProtKB/TrEMBL.
DT 12-SEP-2018, sequence version 1.
DT 24-JAN-2024, entry version 17.
DE RecName: Full=type I site-specific deoxyribonuclease {ECO:0000256|ARBA:ARBA00012654};
DE EC=3.1.21.3 {ECO:0000256|ARBA:ARBA00012654};
GN ORFNames=C5O25_09450 {ECO:0000313|EMBL:PWB06738.1};
OS Paramuribaculum intestinale.
OC Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae;
OC Paramuribaculum.
OX NCBI_TaxID=2094151 {ECO:0000313|EMBL:PWB06738.1, ECO:0000313|Proteomes:UP000244925};
RN [1] {ECO:0000313|Proteomes:UP000244925}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 100764 {ECO:0000313|Proteomes:UP000244925};
RA Clavel T., Strowig T.;
RL Submitted (FEB-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=Endonucleolytic cleavage of DNA to give random double-stranded
CC fragments with terminal 5'-phosphates, ATP is simultaneously
CC hydrolyzed.; EC=3.1.21.3; Evidence={ECO:0000256|ARBA:ARBA00000851};
CC -!- SIMILARITY: Belongs to the HsdR family.
CC {ECO:0000256|ARBA:ARBA00008598}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PWB06738.1}.
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DR EMBL; PUBV01000020; PWB06738.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2V1IW60; -.
DR Proteomes; UP000244925; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0009035; F:type I site-specific deoxyribonuclease activity; IEA:UniProtKB-EC.
DR GO; GO:0009307; P:DNA restriction-modification system; IEA:UniProtKB-KW.
DR Gene3D; 3.90.1570.50; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR007409; Restrct_endonuc_type1_HsdR_N.
DR InterPro; IPR040980; SWI2_SNF2.
DR PANTHER; PTHR42927; HELICASE SUPERFAMILY 1 AND 2 DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR42927:SF1; HELICASE SUPERFAMILY 1 AND 2 DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF04313; HSDR_N; 1.
DR Pfam; PF18766; SWI2_SNF2; 1.
DR SMART; SM00487; DEXDc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Endonuclease {ECO:0000256|ARBA:ARBA00022759, ECO:0000313|EMBL:PWB06738.1};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Restriction system {ECO:0000256|ARBA:ARBA00022747}.
FT DOMAIN 281..486
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
SQ SEQUENCE 1190 AA; 136889 MW; CED13D80822CE9DC CRC64;
MNADNETRFE EHIEAALLAS PLYIGRSSKD FDIKRRVDPG MLWQFLHAQH ETWERLLKRF
KTGDDALNAV IKDYNSKLDN GHSLVDILRN GLKIQGIPVK LMQTKPTLAG EDSNLHELYL
ANRFAVVRQM RYSEDKADKG NELDLCILLN GFPIITAELK NEGTGQNYTN GIYQYRHDRD
PKNAMLRTAL VHFVVDNNYA FMTTFLNGED TSFLPFNVDS VNPQVPGDYA TSYLWKDIWQ
ADSLLNIIDH FIKSVTDNGK TVTFFPRYHQ LRVVRNLIKW VEQEGPGHNY LIEHSAGSGK
TKSMAWLAHQ LVNLVNNDQT PVFDSIIMVT DRIVLNANMA DDVNAFATEA GVVKDIRRGS
KKLAKAINDG GRIIVSTVQK FSYALSELKR DKHRNYAVII DEAHTAIGNE SAKDIVNALS
TDEDIQALIA EMECEGYESN EMDALMAYMQ TMRQQMGHIS YFAFTATPKD KTYALFGKKT
TEGYVAHDYY TMKQAIDEKF ILDVLRNYTT YKTMFEYIEK NSAHPTMAMT TEGVSGVNEP
EELYGEKKSV ALILRKLNQE PENMTLKARL ALNYFMQHTR NKIGGKAKAM FVSDSRAAAV
RYKKIFDNLL AEEYGSEFKT LVAFSGEVEL PDGTKYTEDK MNGWGIKDDK IRETFDTPEY
RILIVADKFQ TGFDQPLLHT MYVDKMLGGI QCIQTLSRLN RCYDKGGVKK EDTMVIDFRN
DADSVQKAFQ KYYQTTILTG EVDTQRLYTL LDDIKVFKLY NTAERDQVVA AMVKEDAASA
VSICNTIVRE RETPLSNEDK DKFRKLVNRY IRSYGFMAQL LTYCDPELER EYIFLRALYP
RLQYTKETLP MEILDRVDLN KLRLQMVMEG TIALENEDAE LSSSRIGDVK APVEDEKKTL
REILDIVNEP YRGFLEDHDI VLRPLNHMML TDPSINEAVR SGNSYGVLRE LFSERAQDLV
LDMSGKGIDL YEEFMNDTPF AREYIRNILD MALRNNQQSN IDLDLHRLSE KIIEEIRSEF
AELAQTSRRL DEVAEYLINI IQKRTKPGLD GANDLLINSL NHLLCNDRLT ELDRRAHFNT
LVGKFEPFLK KLYYLINNRE LTTREGAVDR TQFADCIFGH ESLRRLKHTT DPRYFRFRDY
LEKVRAWRND EAHSAPEFTD EELKVAVHIL VTMYAYVTAK SITDLEMNGL
//