ID A0A2V3IHV6_9FLOR Unreviewed; 1227 AA.
AC A0A2V3IHV6;
DT 12-SEP-2018, integrated into UniProtKB/TrEMBL.
DT 12-SEP-2018, sequence version 1.
DT 24-JAN-2024, entry version 17.
DE SubName: Full=Condensin complex subunit 1 {ECO:0000313|EMBL:PXF41618.1};
GN ORFNames=BWQ96_08629 {ECO:0000313|EMBL:PXF41618.1};
OS Gracilariopsis chorda.
OC Eukaryota; Rhodophyta; Florideophyceae; Rhodymeniophycidae; Gracilariales;
OC Gracilariaceae; Gracilariopsis.
OX NCBI_TaxID=448386 {ECO:0000313|EMBL:PXF41618.1, ECO:0000313|Proteomes:UP000247409};
RN [1] {ECO:0000313|EMBL:PXF41618.1, ECO:0000313|Proteomes:UP000247409}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SKKU-2015 {ECO:0000313|EMBL:PXF41618.1,
RC ECO:0000313|Proteomes:UP000247409};
RC TISSUE=Whole body {ECO:0000313|EMBL:PXF41618.1};
RX PubMed=29688518; DOI=10.1093/molbev/msy081;
RA Lee J., Yang E.C., Graf L., Yang J.H., Qiu H., Zel Zion U., Chan C.X.,
RA Stephens T.G., Weber A.P.M., Boo G.H., Boo S.M., Kim K.M., Shin Y.,
RA Jung M., Lee S.J., Yim H.S., Lee J.H., Bhattacharya D., Yoon H.S.;
RT "Analysis of the draft genome of the red seaweed Gracilariopsis chorda
RT provides insights into genome size evolution in Rhodophyta.";
RL Mol. Biol. Evol. 0:0-0(2018).
CC -!- FUNCTION: Regulatory subunit of the condensin complex, a complex
CC required for conversion of interphase chromatin into mitotic-like
CC condense chromosomes. The condensin complex probably introduces
CC positive supercoils into relaxed DNA in the presence of type I
CC topoisomerases and converts nicked DNA into positive knotted forms in
CC the presence of type II topoisomerases.
CC {ECO:0000256|PIRNR:PIRNR017127}.
CC -!- SUBCELLULAR LOCATION: Chromosome {ECO:0000256|ARBA:ARBA00004286}.
CC Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the CND1 (condensin subunit 1) family.
CC {ECO:0000256|ARBA:ARBA00009606, ECO:0000256|PIRNR:PIRNR017127}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PXF41618.1}.
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DR EMBL; NBIV01000205; PXF41618.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2V3IHV6; -.
DR STRING; 448386.A0A2V3IHV6; -.
DR Proteomes; UP000247409; Unassembled WGS sequence.
DR GO; GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0051301; P:cell division; IEA:UniProtKB-KW.
DR GO; GO:0007076; P:mitotic chromosome condensation; IEA:InterPro.
DR Gene3D; 1.25.10.10; Leucine-rich Repeat Variant; 2.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR026971; CND1/NCAPD3.
DR InterPro; IPR032682; Cnd1_C.
DR InterPro; IPR007673; Condensin_cplx_su1.
DR InterPro; IPR006020; PTB/PI_dom.
DR PANTHER; PTHR14222; CONDENSIN; 1.
DR PANTHER; PTHR14222:SF2; CONDENSIN COMPLEX SUBUNIT 1; 1.
DR Pfam; PF12717; Cnd1; 1.
DR PIRSF; PIRSF017127; Condensin_D2; 2.
DR SUPFAM; SSF48371; ARM repeat; 1.
DR PROSITE; PS01179; PID; 1.
PE 3: Inferred from homology;
KW Cell cycle {ECO:0000256|ARBA:ARBA00023306, ECO:0000256|PIRNR:PIRNR017127};
KW Cell division {ECO:0000256|ARBA:ARBA00022618,
KW ECO:0000256|PIRNR:PIRNR017127}; Chromosome {ECO:0000256|ARBA:ARBA00022454};
KW DNA condensation {ECO:0000256|ARBA:ARBA00023067,
KW ECO:0000256|PIRNR:PIRNR017127};
KW Mitosis {ECO:0000256|ARBA:ARBA00022776, ECO:0000256|PIRNR:PIRNR017127};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000247409}.
FT DOMAIN 1022..1062
FT /note="PID"
FT /evidence="ECO:0000259|PROSITE:PS01179"
FT REGION 410..460
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1124..1227
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 419..449
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1134..1153
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1227 AA; 135548 MW; E5BC61C9D993DF56 CRC64;
MSFQIPLNFE DLTRPNNTQW QVTPSQLRRS SVESLLSLFD EDVTPIFSES SHEHHFNALY
ALITRYKSLK TSEKGHVLNI IEKVSQAITL TDSTSIKVAL YFASGLAVTA SSVTPSCKFW
DKTGRVLLLQ TIYQLLSSIP IPSSSNESAK DQIASLLVRT MLQVLEYPSA AKDKSTRAIL
SQVLSWVLSF DQRQVLPANT ALLHALNRHE HIATPLAIIL HRLAELNASQ ASFVSEFIRE
IARLPSEHLA RDSSAAKSIA TFISELSERL PDMCRANLAL LLSHLDGESY IVRNGLVHMI
GKLIIGKPDP EDPLLQVLLD RAHRDIHAFT RSKAMQTWIS IVNAKVVPIS LYPSLAEMGT
SRLEDKAVAV RKYASQLLTA LLKNNPFGPS LRRSHFEAKW NEIAPNNDIE HAEEDQPPNE
NESEAGDGNE SEPETTVEVE LEQGDDDSTS ELVEEKPLHE KIYRIDEEAE NANDDDGSAV
SIDEELGSQH EEQTNPEEED PEIVLKRKYY MSSLLFIKTV EKGLQTLYDM LRSKSVTDVA
EAVSFLIIAV QFQLEAVSGI AVRIMLPLIL AREANIRQIA VKAYANLLCP GGLELADEKD
AALAIAKSLV ALGIGATTGE LACIESLISA LFREGEGNII SAAVIAVLWD LFEGRIPGAN
VAQRRTACIL VGMIAAERPQ TLQQKIHVLE SVGICDPELA RWSCTAVCKL QEGVDKDGHL
STQLSEVIKT SNSMSTIEQA VNAIFRVSPE PEKIVGALLR DLAKSLHSKP TAINAIDLSR
FLVFVGHVAV KELVRIEVLI SKVRKGIAEQ AKSGGNHDDE EQANAEADRA LELAEKELVN
PSSLLGRYGL LARKLASDNS AKAILQASAV LCLAKLMCVQ EKFCEANLRL LFSILASATE
PLVRSNAVTA LGDLAFRFPN LVEPWSSHIY SSLRDSDEKV RKNTLMTLTH LILNDMIKVK
GQIVGLAICI LDDDERIAEL ARLFFNELAR KASNAIYNIL PDTISCMSKM DDLSKSGFKT
VVSFLVGLMD KEKHGDGMVE KLCHRFRTSE SDRETQELAY CISILNISER GLKKLSENFK
SYSTKLGNDD VYEHISTAVS KCNKQGISST WIQTIEELQQ KIERARAPEN DSEGRRQSLQ
STSSKPADSS KTCNKPSRKP RAQRKKIIIS CSDSESEAAS DVHTEDSDTD GSDSDGVEDL
HDEQEYHPRG SSSRHRSSRR RSSIANQ
//
