ID A0A2V3IKF1_9FLOR Unreviewed; 469 AA.
AC A0A2V3IKF1;
DT 12-SEP-2018, integrated into UniProtKB/TrEMBL.
DT 12-SEP-2018, sequence version 1.
DT 27-MAR-2024, entry version 16.
DE RecName: Full=DDE-1 domain-containing protein {ECO:0000259|Pfam:PF03184};
GN ORFNames=BWQ96_07671 {ECO:0000313|EMBL:PXF42576.1};
OS Gracilariopsis chorda.
OC Eukaryota; Rhodophyta; Florideophyceae; Rhodymeniophycidae; Gracilariales;
OC Gracilariaceae; Gracilariopsis.
OX NCBI_TaxID=448386 {ECO:0000313|EMBL:PXF42576.1, ECO:0000313|Proteomes:UP000247409};
RN [1] {ECO:0000313|EMBL:PXF42576.1, ECO:0000313|Proteomes:UP000247409}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SKKU-2015 {ECO:0000313|EMBL:PXF42576.1,
RC ECO:0000313|Proteomes:UP000247409};
RC TISSUE=Whole body {ECO:0000313|EMBL:PXF42576.1};
RX PubMed=29688518; DOI=10.1093/molbev/msy081;
RA Lee J., Yang E.C., Graf L., Yang J.H., Qiu H., Zel Zion U., Chan C.X.,
RA Stephens T.G., Weber A.P.M., Boo G.H., Boo S.M., Kim K.M., Shin Y.,
RA Jung M., Lee S.J., Yim H.S., Lee J.H., Bhattacharya D., Yoon H.S.;
RT "Analysis of the draft genome of the red seaweed Gracilariopsis chorda
RT provides insights into genome size evolution in Rhodophyta.";
RL Mol. Biol. Evol. 0:0-0(2018).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PXF42576.1}.
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DR EMBL; NBIV01000157; PXF42576.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2V3IKF1; -.
DR Proteomes; UP000247409; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR004875; DDE_SF_endonuclease_dom.
DR InterPro; IPR036397; RNaseH_sf.
DR PANTHER; PTHR19303:SF57; HTH CENPB-TYPE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR19303; TRANSPOSON; 1.
DR Pfam; PF03184; DDE_1; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000247409}.
FT DOMAIN 173..300
FT /note="DDE-1"
FT /evidence="ECO:0000259|Pfam:PF03184"
FT COILED 384..428
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 469 AA; 53909 MW; B19C941E93BC680B CRC64;
MVQCYVRGLP QSRRLQIPFK NYRPGEYFVR SFLRRHQEIS LKRRSNLEKL RAIAMSPENP
ASHFARIVQV YKEYKINSPE QVFNIEENGF SVRTATRARS KGLFNSKRRS NSVKLKWSGN
AQHGTIMPVV SGDGRAWSPL VVLQGARAKY RLRADGTRET PSCYLPANAI TCYKDPAGVD
TAVFFEWVEH FVEETTEIRR KHRHIVLKFD GYGAHCSYKA LKLLDDNGII ALCLPAHTSH
RTQVLDYSVF SLFKNYFPNY LNERTLCAQD DSQNDVYTIC DLLTKAYIRA VTYNNIVKGF
EACGLWDPHK QTANPGFIKK TDITNIGTAS CQEVAHENYL AFVKNYVENR NMLRSDGEVV
ENGTLVTTAG ALLTTRVVLD RLKAKELEKR AKIVERAARA AEAEARREQR EQESVRRAEQ
RAQAQREKEL FALWLSNRGL RWEQLSRSRA DRRQWARLRA AQRQGATEV
//