ID A0A2V3IR48_9FLOR Unreviewed; 621 AA.
AC A0A2V3IR48;
DT 12-SEP-2018, integrated into UniProtKB/TrEMBL.
DT 12-SEP-2018, sequence version 1.
DT 24-JAN-2024, entry version 11.
DE SubName: Full=Protein hedgehog {ECO:0000313|EMBL:PXF44601.1};
GN ORFNames=BWQ96_05678 {ECO:0000313|EMBL:PXF44601.1};
OS Gracilariopsis chorda.
OC Eukaryota; Rhodophyta; Florideophyceae; Rhodymeniophycidae; Gracilariales;
OC Gracilariaceae; Gracilariopsis.
OX NCBI_TaxID=448386 {ECO:0000313|EMBL:PXF44601.1, ECO:0000313|Proteomes:UP000247409};
RN [1] {ECO:0000313|EMBL:PXF44601.1, ECO:0000313|Proteomes:UP000247409}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SKKU-2015 {ECO:0000313|EMBL:PXF44601.1,
RC ECO:0000313|Proteomes:UP000247409};
RC TISSUE=Whole body {ECO:0000313|EMBL:PXF44601.1};
RX PubMed=29688518; DOI=10.1093/molbev/msy081;
RA Lee J., Yang E.C., Graf L., Yang J.H., Qiu H., Zel Zion U., Chan C.X.,
RA Stephens T.G., Weber A.P.M., Boo G.H., Boo S.M., Kim K.M., Shin Y.,
RA Jung M., Lee S.J., Yim H.S., Lee J.H., Bhattacharya D., Yoon H.S.;
RT "Analysis of the draft genome of the red seaweed Gracilariopsis chorda
RT provides insights into genome size evolution in Rhodophyta.";
RL Mol. Biol. Evol. 0:0-0(2018).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PXF44601.1}.
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DR EMBL; NBIV01000087; PXF44601.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2V3IR48; -.
DR STRING; 448386.A0A2V3IR48; -.
DR Proteomes; UP000247409; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0016539; P:intein-mediated protein splicing; IEA:InterPro.
DR GO; GO:0016540; P:protein autoprocessing; IEA:InterPro.
DR CDD; cd00081; Hint; 1.
DR Gene3D; 2.170.16.10; Hedgehog/Intein (Hint) domain; 1.
DR InterPro; IPR001767; Hedgehog_Hint.
DR InterPro; IPR003587; Hint_dom_N.
DR InterPro; IPR036844; Hint_dom_sf.
DR InterPro; IPR006141; Intein_N.
DR PANTHER; PTHR46706; PROTEIN QUA-1-RELATED; 1.
DR PANTHER; PTHR46706:SF12; PROTEIN QUA-1-RELATED; 1.
DR Pfam; PF01079; Hint; 1.
DR SMART; SM00306; HintN; 1.
DR SUPFAM; SSF51294; Hedgehog/intein (Hint) domain; 1.
DR PROSITE; PS50817; INTEIN_N_TER; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000247409};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 20..40
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 95..113
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 440..533
FT /note="Hint"
FT /evidence="ECO:0000259|SMART:SM00306"
FT REGION 324..345
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 363..440
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 364..399
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 400..416
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 621 AA; 66785 MW; 85BADB6975C3AE8B CRC64;
MPDPKLLFQA LPDFRSPSPL DLLLTAYLLC LSSFLLANKF CPIDGNLVDY CAFFFPLSPI
TFARELNLLL GSSRSVCIYF CHLSLFITGK MTNKVFCVIL SIILSVVSSA VVSKDRGTSK
YPPLLVDPPR SLYIPTTARQ LHESTLLDIN MHVASESLTD SQCGGSTVLH EAVAFCNTSR
VGLQGVSILP HASIVHDGNR CGTGDPLDYT HVVPAALLID GRTASLSGVG PLYNRLSANA
RAFNAFGVLN DLAPVYVGFE FSNSRVCGGN VVYPQGTIYI FIRTRPDASD LNFGFAYLGA
AELGMVTVKD DEQLCLYKET RKLAPGQSPL STPTPSPTGV PRMPQDTFIL ENAPELARNC
FPLRGFNTTR TGPQPTDLPG PTASPSASPT ISVTPSVTPS NVPTPSPSPS MQVSPSPSPS
PSNTIEGGGE ATPEADEDDS VCFPESAHVE LECGEVKAIG DISIGDRVLV SGRAYSEVYL
FTHRDSNVLY NFYRIKVSSG AVISLTSTHY IPVDGRLKTA ESVHVGDVLT LGNGTFDVVT
GIDRQHMRGL FNPHTLEGTI VVDGIVASTF TKTVMPSVGE ALLAPIRMMF KWRMFDGLLG
AMFKEGNSML VRYVPRGGAL W
//
