ID A0A2V3J0L3_9FLOR Unreviewed; 1316 AA.
AC A0A2V3J0L3;
DT 12-SEP-2018, integrated into UniProtKB/TrEMBL.
DT 12-SEP-2018, sequence version 1.
DT 27-MAR-2024, entry version 23.
DE RecName: Full=Probable ATP-dependent transporter ycf16 {ECO:0000256|ARBA:ARBA00014334};
GN ORFNames=BWQ96_02798 {ECO:0000313|EMBL:PXF47467.1};
OS Gracilariopsis chorda.
OC Eukaryota; Rhodophyta; Florideophyceae; Rhodymeniophycidae; Gracilariales;
OC Gracilariaceae; Gracilariopsis.
OX NCBI_TaxID=448386 {ECO:0000313|EMBL:PXF47467.1, ECO:0000313|Proteomes:UP000247409};
RN [1] {ECO:0000313|EMBL:PXF47467.1, ECO:0000313|Proteomes:UP000247409}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SKKU-2015 {ECO:0000313|EMBL:PXF47467.1,
RC ECO:0000313|Proteomes:UP000247409};
RC TISSUE=Whole body {ECO:0000313|EMBL:PXF47467.1};
RX PubMed=29688518; DOI=10.1093/molbev/msy081;
RA Lee J., Yang E.C., Graf L., Yang J.H., Qiu H., Zel Zion U., Chan C.X.,
RA Stephens T.G., Weber A.P.M., Boo G.H., Boo S.M., Kim K.M., Shin Y.,
RA Jung M., Lee S.J., Yim H.S., Lee J.H., Bhattacharya D., Yoon H.S.;
RT "Analysis of the draft genome of the red seaweed Gracilariopsis chorda
RT provides insights into genome size evolution in Rhodophyta.";
RL Mol. Biol. Evol. 0:0-0(2018).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}. Plastid,
CC chloroplast {ECO:0000256|ARBA:ARBA00004229}.
CC -!- SIMILARITY: Belongs to the ABC transporter superfamily. Ycf16 family.
CC {ECO:0000256|ARBA:ARBA00006216}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PXF47467.1}.
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DR EMBL; NBIV01000024; PXF47467.1; -; Genomic_DNA.
DR STRING; 448386.A0A2V3J0L3; -.
DR Proteomes; UP000247409; Unassembled WGS sequence.
DR GO; GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0140359; F:ABC-type transporter activity; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR CDD; cd18577; ABC_6TM_Pgp_ABCB1_D1_like; 1.
DR CDD; cd18578; ABC_6TM_Pgp_ABCB1_D2_like; 1.
DR CDD; cd03249; ABC_MTABC3_MDL1_MDL2; 2.
DR Gene3D; 1.20.1560.10; ABC transporter type 1, transmembrane domain; 2.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR011527; ABC1_TM_dom.
DR InterPro; IPR036640; ABC1_TM_sf.
DR InterPro; IPR003439; ABC_transporter-like_ATP-bd.
DR InterPro; IPR017871; ABC_transporter-like_CS.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR039421; Type_1_exporter.
DR PANTHER; PTHR24221; ATP-BINDING CASSETTE SUB-FAMILY B; 1.
DR PANTHER; PTHR24221:SF503; LP14331P; 1.
DR Pfam; PF00664; ABC_membrane; 2.
DR Pfam; PF00005; ABC_tran; 2.
DR SMART; SM00382; AAA; 2.
DR SUPFAM; SSF90123; ABC transporter transmembrane region; 2.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS50929; ABC_TM1F; 2.
DR PROSITE; PS00211; ABC_TRANSPORTER_1; 2.
DR PROSITE; PS50893; ABC_TRANSPORTER_2; 2.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000247409};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT TRANSMEM 64..91
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 120..143
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 296..316
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 730..754
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 774..798
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 850..870
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 953..977
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 67..359
FT /note="ABC transmembrane type-1"
FT /evidence="ECO:0000259|PROSITE:PS50929"
FT DOMAIN 396..658
FT /note="ABC transporter"
FT /evidence="ECO:0000259|PROSITE:PS50893"
FT DOMAIN 734..1018
FT /note="ABC transmembrane type-1"
FT /evidence="ECO:0000259|PROSITE:PS50929"
FT DOMAIN 1052..1293
FT /note="ABC transporter"
FT /evidence="ECO:0000259|PROSITE:PS50893"
FT REGION 1..24
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..23
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1316 AA; 142557 MW; 2BA43D7B241F6707 CRC64;
MADEVNGTST PSEPNTSSGE NRKRSFFSRF KKGDKAKAAA QKEQKHPPVK FVQLFRHATR
GEKVYMAIAC ISAIIHGSLM PVFTILFGGI IDEFQDASSN PASSDILEQV TEQVGSVAKW
FLVLGGVAFV TSLIQVRFQM VVAQGISARL RHMYFESLLS QDFTWYGQED GGELTARVAG
DVNLIQGGIG DKVTSAVQFF SMFVVGVIIA FVYGPLLTLV ILSIAPLMIA GGAVFAKIAA
DSSGEGAGAY GSAGGVASEV ISLIRVVTAY NGQETEARRY EVELQKAFKA NVKKSIYAGL
GFGFTMFIIF CAYAIAFTFG ANRVRSGAMS TGDILTTFFS VFIACFSIGQ SAPSFQAFAV
AQGAAPRVYE IIDRESEINP LNEDDGEVIP DFKGNVSFKN VNFNYKNRIS DDLETEEDRR
YVLENFNLSI PTGTSHALVG ASGCGKSTTV RLIERFYDVS DGAVKFDDYD VRALNVKWLR
SQIGYVGQMP TLFARSIRDN IALGASLEPV GDEATGRKVL SRREVTDEEI VEAAKKANAH
DFIMKLPERY DTMLGERGAL LSGGQKQRVC IARALVRNPK ILILDEATAA LDAQSERIVQ
KALEAASAGR TTITIAHRLS TVKNADIISV IDKGVIVESG THKDLLSIEG GAYRTLIEHQ
NLEAQKAKEV KEKVGEGEPQ ADAMIAKATS TSVSKSIRRT GAEEEDELPE EAAVDKGILL
RAFKVNRNEW FFILMGIVGA TLNGASFPAM AIIFAEVINE ILVDNSKGAI SKWALLYVAI
GGAAFLGNFL QHASLGYSGE QMTLKLRRTA FRAILKQDMG FFDMKKNSLG ALTTRLATEA
TAVKGLTGDV LGSIAFGVST ILTGFLIAYI SCWRVALVVT TVFPLSAISQ GLQLKMMTGF
DADSETRYAA AGTVASEAVD NFETVTSIGV QDVFLNTYKE EVNKTIKNGR RTALVAGIAF
GLSEFIAQAL WAVSFWIGSI FVRNRQCEFV DLMKAITGLL FGGMMLGNLS STMPDWGKAK
IAATRIFRLL DRESSIDPTV DVDFKEKIEG NAEMKKVEFE YPSRPNVGVL RGLSVEVKKG
QTLALVGASG CGKSTVVGLL ERFYDARSGS VTIDGSNITE YDVKWVRKHM GVVAQEPDLF
NRSVRDNIAY GLDHVDGTPV TDEMIIAAAK AANAHSFISE LEEGYDTVVG ARGTRLSGGQ
RQRVAIARAL VREPKILLLD EATSALDAVS ERVVQQALDR AGKGRTTVAI AHRLSTVKDA
DAIAVVARGK IVEMGRHEQL LRIENGEYAN LVKNQLSGGT RRAERKRLLA ACGAYE
//
