ID A0A2V3WDF3_9BACI Unreviewed; 396 AA.
AC A0A2V3WDF3;
DT 12-SEP-2018, integrated into UniProtKB/TrEMBL.
DT 12-SEP-2018, sequence version 1.
DT 24-JAN-2024, entry version 14.
DE SubName: Full=L,D-peptidoglycan transpeptidase YkuD (ErfK/YbiS/YcfS/YnhG family) {ECO:0000313|EMBL:PXW92936.1};
GN ORFNames=DES38_10114 {ECO:0000313|EMBL:PXW92936.1};
OS Streptohalobacillus salinus.
OC Bacteria; Bacillota; Bacilli; Bacillales; Bacillaceae; Streptohalobacillus.
OX NCBI_TaxID=621096 {ECO:0000313|EMBL:PXW92936.1, ECO:0000313|Proteomes:UP000247922};
RN [1] {ECO:0000313|EMBL:PXW92936.1, ECO:0000313|Proteomes:UP000247922}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 22440 {ECO:0000313|EMBL:PXW92936.1,
RC ECO:0000313|Proteomes:UP000247922};
RA Goeker M.;
RT "Genomic Encyclopedia of Type Strains, Phase IV (KMG-IV): sequencing the
RT most valuable type-strain genomes for metagenomic binning, comparative
RT biology and taxonomic classification.";
RL Submitted (MAY-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PXW92936.1}.
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DR EMBL; QJJR01000001; PXW92936.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2V3WDF3; -.
DR OrthoDB; 186490at2; -.
DR Proteomes; UP000247922; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0016740; F:transferase activity; IEA:InterPro.
DR CDD; cd16913; YkuD_like; 1.
DR Gene3D; 2.30.30.40; SH3 Domains; 1.
DR InterPro; IPR005490; LD_TPept_cat_dom.
DR InterPro; IPR003646; SH3-like_bac-type.
DR PANTHER; PTHR38589; BLR0621 PROTEIN; 1.
DR PANTHER; PTHR38589:SF1; YKUD DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF08239; SH3_3; 1.
DR Pfam; PF03734; YkuD; 1.
DR SMART; SM00287; SH3b; 1.
DR PROSITE; PS51781; SH3B; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000247922};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 7..27
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 92..156
FT /note="SH3b"
FT /evidence="ECO:0000259|PROSITE:PS51781"
FT REGION 60..83
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 158..197
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 159..178
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 179..193
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 396 AA; 43152 MW; 58E5AB2186F90611 CRC64;
MNKNTLLHML LSVIVFAVIF MLVLPGFQSE EPIIATDLET HGYASVSREL QVLNENFFGS
ETPTEATTDQ EAESDSLDGG STDSMTELFA TTATRYVNID GLNMREGPGT HHAVLDVLAL
NQPVEVSTTA TNGAWVAIKF GDKLGYVNDA YLNKQAVVKQ AEPSATAKSE TTTEKKSSTP
DPNVEKKATE QPDPPAVKNK AQALTTVANN QQLILVTNKQ ASQVNVTVET FERDANGDWQ
PVFSTNGYIG KSGFSFNKKE GDGASPAGKF SIGTAFGSKG NPGTALPFRG ITDDDVWVDD
PESSLYNSWQ SKKKSSDQYT SAENMNIPLY RYGFVINYNT NRTPYRGSAI FFHIGNSYTL
GCTAVSEANV IRLIKWLNPN KNPTIIQTPE SGLRNF
//
