ID A0A2W5Y6G2_9MICO Unreviewed; 594 AA.
AC A0A2W5Y6G2;
DT 12-SEP-2018, integrated into UniProtKB/TrEMBL.
DT 12-SEP-2018, sequence version 1.
DT 24-JAN-2024, entry version 18.
DE SubName: Full=DEDD exnuclease domain-containing protein {ECO:0000313|EMBL:PZR53794.1};
GN ORFNames=DNL40_06635 {ECO:0000313|EMBL:PZR53794.1};
OS Xylanimonas oleitrophica.
OC Bacteria; Actinomycetota; Actinomycetes; Micrococcales;
OC Promicromonosporaceae; Xylanimonas.
OX NCBI_TaxID=2607479 {ECO:0000313|EMBL:PZR53794.1, ECO:0000313|Proteomes:UP000248783};
RN [1] {ECO:0000313|EMBL:PZR53794.1, ECO:0000313|Proteomes:UP000248783}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=PW21 {ECO:0000313|EMBL:PZR53794.1,
RC ECO:0000313|Proteomes:UP000248783};
RA Nagkirti P., Shaikh A., Gowdaman V., Engineer A.E., Dagar S.,
RA Dhakephalkar P.K.;
RT "Whole genome sequencing of a novel hydrocarbon degrading bacterial strain,
RT PW21 isolated from oil contaminated produced water sample.";
RL Submitted (JUN-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PZR53794.1}.
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DR EMBL; QKWH01000003; PZR53794.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2W5Y6G2; -.
DR Proteomes; UP000248783; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:InterPro.
DR GO; GO:0004527; F:exonuclease activity; IEA:UniProt.
DR GO; GO:0006260; P:DNA replication; IEA:InterPro.
DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro.
DR CDD; cd06127; DEDDh; 1.
DR CDD; cd10434; GIY-YIG_UvrC_Cho; 1.
DR Gene3D; 3.40.1440.10; GIY-YIG endonuclease; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR006054; DnaQ.
DR InterPro; IPR013520; Exonuclease_RNaseT/DNA_pol3.
DR InterPro; IPR000305; GIY-YIG_endonuc.
DR InterPro; IPR035901; GIY-YIG_endonuc_sf.
DR InterPro; IPR047296; GIY-YIG_UvrC_Cho.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR NCBIfam; TIGR00573; dnaq; 1.
DR PANTHER; PTHR30562:SF1; UVRABC SYSTEM PROTEIN C; 1.
DR PANTHER; PTHR30562; UVRC/OXIDOREDUCTASE; 1.
DR Pfam; PF01541; GIY-YIG; 1.
DR Pfam; PF00929; RNase_T; 1.
DR SMART; SM00479; EXOIII; 1.
DR SMART; SM00465; GIYc; 1.
DR SUPFAM; SSF82771; GIY-YIG endonuclease; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50164; GIY_YIG; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000248783}.
FT DOMAIN 240..318
FT /note="GIY-YIG"
FT /evidence="ECO:0000259|PROSITE:PS50164"
FT REGION 1..20
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 594 AA; 63156 MW; 9095233A8CF6BE3F CRC64;
MTSQAHAPRT PRADAPSAAG VLDGFQPSFE DLGTPLREVT FVVVDLETTG TRAAESGITE
IGAVKVRGGE VLGEFQSLVN PGREVPAFVA RLTGITTAMV ATAPPVSLVL PSFLEWARGA
VLVAHNAPFD VGFLKAAAAD LGYEWPGFAV VDTVPLARRV VTRDEVPNHK LSTLATFFRA
RVTPEHRALA DARATVDVLH GLLDRLGATG VTHLEDLAGA ADPVPPDVRK KRHLADGLPE
APGVYLFRGP GDEVLYVGTS TNIRKRVRSY FTAAEKRRRI TEMVRIAHAV TPVVCATPLE
AAVRELRLIA QHEPRYNRRS KHPERQTWVR LTDEAYPRLS VVRDVRAGTP HIGPFSSRRS
AQEAVEALHD ALPLRQCTLR LAAVSRSPGS PCALAGMGRC SAPCTAVGGP DTAYADVARS
AALALTDDPS PVVSALAARV ARLAAEERFE EAGLVTRRLR SYVQGAGRAQ RLAPLAACSE
LVAARPTAAG GWELVVVRHA RLAGTAVTRP GEDPLPVVDA LRATAEVVEP PVAPAPACHP
EEAALVIDWL EQPGVRLVHA SQPWSVPVRS ALAHADLAGV SGEVRAQITS MAPC
//
