ID A0A2W7S4F5_9BACT Unreviewed; 476 AA.
AC A0A2W7S4F5;
DT 12-SEP-2018, integrated into UniProtKB/TrEMBL.
DT 12-SEP-2018, sequence version 1.
DT 27-MAR-2024, entry version 21.
DE SubName: Full=Putative nucleotidyltransferase with HDIG domain {ECO:0000313|EMBL:PZX61849.1};
GN ORFNames=LX80_02010 {ECO:0000313|EMBL:PZX61849.1};
OS Hydrotalea sandarakina.
OC Bacteria; Bacteroidota; Chitinophagia; Chitinophagales; Chitinophagaceae;
OC Hydrotalea.
OX NCBI_TaxID=1004304 {ECO:0000313|EMBL:PZX61849.1, ECO:0000313|Proteomes:UP000249720};
RN [1] {ECO:0000313|EMBL:PZX61849.1, ECO:0000313|Proteomes:UP000249720}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 23241 {ECO:0000313|EMBL:PZX61849.1,
RC ECO:0000313|Proteomes:UP000249720};
RA Goeker M.;
RT "Genomic Encyclopedia of Archaeal and Bacterial Type Strains, Phase II
RT (KMG-II): from individual species to whole genera.";
RL Submitted (JUN-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC Evidence={ECO:0000256|ARBA:ARBA00001946};
CC -!- SIMILARITY: Belongs to the tRNA nucleotidyltransferase/poly(A)
CC polymerase family. {ECO:0000256|RuleBase:RU003953}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PZX61849.1}.
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DR EMBL; QKZV01000006; PZX61849.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2W7S4F5; -.
DR OrthoDB; 9805698at2; -.
DR Proteomes; UP000249720; Unassembled WGS sequence.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.
DR GO; GO:0016779; F:nucleotidyltransferase activity; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0031123; P:RNA 3'-end processing; IEA:UniProt.
DR GO; GO:0042245; P:RNA repair; IEA:UniProtKB-KW.
DR GO; GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
DR CDD; cd00077; HDc; 1.
DR CDD; cd05398; NT_ClassII-CCAase; 1.
DR Gene3D; 1.10.246.80; -; 1.
DR Gene3D; 3.30.460.10; Beta Polymerase, domain 2; 1.
DR Gene3D; 1.10.3090.10; cca-adding enzyme, domain 2; 1.
DR InterPro; IPR003607; HD/PDEase_dom.
DR InterPro; IPR006674; HD_domain.
DR InterPro; IPR006675; HDIG_dom.
DR InterPro; IPR043519; NT_sf.
DR InterPro; IPR002646; PolA_pol_head_dom.
DR InterPro; IPR032828; PolyA_RNA-bd.
DR NCBIfam; TIGR00277; HDIG; 1.
DR PANTHER; PTHR47545; MULTIFUNCTIONAL CCA PROTEIN; 1.
DR PANTHER; PTHR47545:SF1; MULTIFUNCTIONAL CCA PROTEIN; 1.
DR Pfam; PF01966; HD; 1.
DR Pfam; PF01743; PolyA_pol; 1.
DR Pfam; PF12627; PolyA_pol_RNAbd; 1.
DR SMART; SM00471; HDc; 1.
DR SUPFAM; SSF81301; Nucleotidyltransferase; 1.
DR SUPFAM; SSF81891; Poly A polymerase C-terminal region-like; 1.
PE 3: Inferred from homology;
KW Magnesium {ECO:0000256|ARBA:ARBA00022842};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW Reference proteome {ECO:0000313|Proteomes:UP000249720};
KW RNA repair {ECO:0000256|ARBA:ARBA00022800};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|RuleBase:RU003953};
KW Transferase {ECO:0000256|ARBA:ARBA00022679, ECO:0000256|RuleBase:RU003953};
KW tRNA processing {ECO:0000256|ARBA:ARBA00022694}.
FT DOMAIN 259..383
FT /note="HD/PDEase"
FT /evidence="ECO:0000259|SMART:SM00471"
SQ SEQUENCE 476 AA; 53305 MW; 808AA84942044B7A CRC64;
MQINLSNTEA NIINNIALAA QELNLPVYLI GGFVRDKILG RPTKDADIVC LGDGIALAHA
VAEKFNPTPY VAFFKNFGTA QIKIPLQNDS YFEVEFVGAR KESYTQNSRK PQVTSGSLAD
DQLRRDFTIN AMGISLNKAD FGTLIDPFNG INDLKNKIIQ TPLDPIQTFS DDPLRMMRAI
RFATQLNFSI APATFAAIQQ DAHRISIVSQ ERITDELNKI LLASKPSIGF DLLSKSGLLS
IIFPQMMALH GAENIDGKGH KDNFYHTLQV IDNIAQTTND LWLRWAAVLH DIGKPATKRF
EPGQGFTFHG HEVVGAKMVP KIFAQLKLPM NEKMKFVKKM VELHLRPISL TKENISDSAI
RRLLFDAGDD IDALMLLCNA DITSKNKQKV KRYMQNFELV KERMKAVEEK DHIRNWQPPL
SGEDIMRIFG ISPGRQVGII KDAIKEAILD GIIPNTYEAA YQFMLQKAAS LNLQPV
//
