ID A0A2X0IE64_9ACTN Unreviewed; 562 AA.
AC A0A2X0IE64;
DT 12-SEP-2018, integrated into UniProtKB/TrEMBL.
DT 12-SEP-2018, sequence version 1.
DT 27-MAR-2024, entry version 26.
DE SubName: Full=Transcription termination factor Rho {ECO:0000313|EMBL:RAG82827.1};
DE Flags: Fragment;
GN ORFNames=DN069_25610 {ECO:0000313|EMBL:RAG82827.1};
OS Streptacidiphilus pinicola.
OC Bacteria; Actinomycetota; Actinomycetes; Kitasatosporales;
OC Streptomycetaceae; Streptacidiphilus.
OX NCBI_TaxID=2219663 {ECO:0000313|EMBL:RAG82827.1, ECO:0000313|Proteomes:UP000248889};
RN [1] {ECO:0000313|EMBL:RAG82827.1, ECO:0000313|Proteomes:UP000248889}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MMS16-CNU450 {ECO:0000313|EMBL:RAG82827.1,
RC ECO:0000313|Proteomes:UP000248889};
RA Roh S.G., Park S., Kim M.-K., Yun B.-R., Park J., Kim M.J., Kim Y.S.,
RA Kim S.B.;
RT "Streptacidiphilus pinicola sp. nov., isolated from pine grove soil.";
RL Submitted (JUN-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the Rho family. {ECO:0000256|PROSITE-
CC ProRule:PRU01203}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RAG82827.1}.
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DR EMBL; QKYN01000102; RAG82827.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2X0IE64; -.
DR OrthoDB; 9805197at2; -.
DR Proteomes; UP000248889; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0008186; F:ATP-dependent activity, acting on RNA; IEA:InterPro.
DR GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006353; P:DNA-templated transcription termination; IEA:UniProtKB-KW.
DR CDD; cd01128; rho_factor_C; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR HAMAP; MF_01884; Rho; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR000194; ATPase_F1/V1/A1_a/bsu_nucl-bd.
DR InterPro; IPR011129; CSD.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR041703; Rho_factor_ATP-bd.
DR InterPro; IPR011113; Rho_RNA-bd.
DR InterPro; IPR004665; Term_rho.
DR NCBIfam; TIGR00767; rho; 1.
DR PANTHER; PTHR46425; TRANSCRIPTION TERMINATION FACTOR RHO; 1.
DR PANTHER; PTHR46425:SF1; TRANSCRIPTION TERMINATION FACTOR RHO; 1.
DR Pfam; PF00006; ATP-synt_ab; 1.
DR Pfam; PF07497; Rho_RNA_bind; 1.
DR SMART; SM00382; AAA; 1.
DR SMART; SM00357; CSP; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51856; RHO_RNA_BD; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022806};
KW Helicase {ECO:0000256|ARBA:ARBA00022806};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022806};
KW Reference proteome {ECO:0000313|Proteomes:UP000248889};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU01203}; Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW Transcription termination {ECO:0000256|ARBA:ARBA00022472}.
FT DOMAIN 188..263
FT /note="Rho RNA-BD"
FT /evidence="ECO:0000259|PROSITE:PS51856"
FT REGION 1..183
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 58..112
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 113..147
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:RAG82827.1"
SQ SEQUENCE 562 AA; 61229 MW; 3A11C6801EE213BB CRC64;
VQTSTEAAAP AATERPARRS RRATAPAGSP EGGAATATVT AEAAQASATA APAQAEKPVV
EKADKAEKPA ADAQAGTETR ERGERAERGE RGDGRESRRE RRNRRDRREG GQDGGQGQQS
QGGRQQDGQG GRQGRQQQGQ SQGQQGGGDF EDDEFGGRRR GRYRDRNRRR GDRFDGVPEP
QVGEDDVLIP VAGILDILDN YAFVRTSGYL AGPNDVYVSL AQVRKNGLRK GDAITGAVKQ
PKEGERREKF NALVRLDSVN GTDAESARNR PEFTKLTPLY PQDRLRLETD PGVLTTRIID
LVAPIGKGQR GLIVAPPKTG KTMIMQAIAN AITHNNPETH LMVVLVDERP EEVTDMQRSV
KGEVISSTFD RPAEDHTTVA ELAIERAKRL VELGHDVVVL LDSITRLGRA YNLAAPASGR
ILSGGVDSTA LYPPKKFFGA ARNIENGGSL TILATALVET GSRMDEVIFE EFKGTGNMEL
KLDRKLADKR IFPAVDVDPS GTRKEEILMS PEELKIVWKL RRVLHALDSQ QAIELLLDKM
KQTKSNAEFL MQIAKTTPGQ DD
//
