GenomeNet

Database: UniProt
Entry: A0A2X0JZT3_9ACTN
LinkDB: A0A2X0JZT3_9ACTN
Original site: A0A2X0JZT3_9ACTN 
ID   A0A2X0JZT3_9ACTN        Unreviewed;       207 AA.
AC   A0A2X0JZT3;
DT   12-SEP-2018, integrated into UniProtKB/TrEMBL.
DT   12-SEP-2018, sequence version 1.
DT   24-JAN-2024, entry version 13.
DE   RecName: Full=Ribosome hibernation promoting factor {ECO:0000256|HAMAP-Rule:MF_00839};
DE            Short=HPF {ECO:0000256|HAMAP-Rule:MF_00839};
GN   Name=raiA {ECO:0000313|EMBL:RAG80739.1};
GN   Synonyms=hpf {ECO:0000256|HAMAP-Rule:MF_00839};
GN   ORFNames=DN069_36530 {ECO:0000313|EMBL:RAG80739.1};
OS   Streptacidiphilus pinicola.
OC   Bacteria; Actinomycetota; Actinomycetes; Kitasatosporales;
OC   Streptomycetaceae; Streptacidiphilus.
OX   NCBI_TaxID=2219663 {ECO:0000313|EMBL:RAG80739.1, ECO:0000313|Proteomes:UP000248889};
RN   [1] {ECO:0000313|EMBL:RAG80739.1, ECO:0000313|Proteomes:UP000248889}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=MMS16-CNU450 {ECO:0000313|EMBL:RAG80739.1,
RC   ECO:0000313|Proteomes:UP000248889};
RA   Roh S.G., Park S., Kim M.-K., Yun B.-R., Park J., Kim M.J., Kim Y.S.,
RA   Kim S.B.;
RT   "Streptacidiphilus pinicola sp. nov., isolated from pine grove soil.";
RL   Submitted (JUN-2018) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Required for dimerization of active 70S ribosomes into 100S
CC       ribosomes in stationary phase; 100S ribosomes are translationally
CC       inactive and sometimes present during exponential growth.
CC       {ECO:0000256|HAMAP-Rule:MF_00839}.
CC   -!- SUBUNIT: Interacts with 100S ribosomes. {ECO:0000256|HAMAP-
CC       Rule:MF_00839}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|HAMAP-Rule:MF_00839}.
CC   -!- SIMILARITY: Belongs to the HPF/YfiA ribosome-associated protein family.
CC       Long HPF subfamily. {ECO:0000256|HAMAP-Rule:MF_00839}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:RAG80739.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; QKYN01000201; RAG80739.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A2X0JZT3; -.
DR   OrthoDB; 9794975at2; -.
DR   Proteomes; UP000248889; Unassembled WGS sequence.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0044238; P:primary metabolic process; IEA:InterPro.
DR   GO; GO:0006417; P:regulation of translation; IEA:UniProtKB-UniRule.
DR   CDD; cd00552; RaiA; 1.
DR   Gene3D; 3.30.160.100; Ribosome hibernation promotion factor-like; 1.
DR   Gene3D; 3.30.505.50; Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain; 1.
DR   HAMAP; MF_00839; HPF; 1.
DR   InterPro; IPR034694; HPF_long/plastid.
DR   InterPro; IPR036567; RHF-like.
DR   InterPro; IPR003489; RHF/RaiA.
DR   InterPro; IPR032528; Ribosom_S30AE_C.
DR   InterPro; IPR038416; Ribosom_S30AE_C_sf.
DR   NCBIfam; TIGR00741; yfiA; 1.
DR   PANTHER; PTHR33231; 30S RIBOSOMAL PROTEIN; 1.
DR   PANTHER; PTHR33231:SF1; 30S RIBOSOMAL PROTEIN; 1.
DR   Pfam; PF16321; Ribosom_S30AE_C; 1.
DR   Pfam; PF02482; Ribosomal_S30AE; 1.
DR   SUPFAM; SSF69754; Ribosome binding protein Y (YfiA homologue); 1.
PE   3: Inferred from homology;
KW   Cytoplasm {ECO:0000256|HAMAP-Rule:MF_00839};
KW   Reference proteome {ECO:0000313|Proteomes:UP000248889};
KW   Translation regulation {ECO:0000256|ARBA:ARBA00022845, ECO:0000256|HAMAP-
KW   Rule:MF_00839}.
FT   DOMAIN          147..200
FT                   /note="Sigma 54 modulation/S30EA ribosomal protein C-
FT                   terminal"
FT                   /evidence="ECO:0000259|Pfam:PF16321"
SQ   SEQUENCE   207 AA;  22973 MW;  00E3EE088CE58669 CRC64;
     MDIVVKGRKT EVPERFRRHV AEKLERINKL DGKVISVDVE LSKEHNPRQS DHADQVEITL
     RSRGPVIRAE ASSSDPYSAL DLASAKLDAQ LRKAADRRRI SKGPRAPMSV AQATAALSET
     PGQATPEELS PPKRTMQGSV AVEGDGPLVV REKTHPAAPM ALDQALYEME LVGHDFYLFV
     DSDTLQPSVV YRRHAYDYGV IHLKVEE
//
DBGET integrated database retrieval system