ID A0A2X4T5B1_SALER Unreviewed; 163 AA.
AC A0A2X4T5B1;
DT 12-SEP-2018, integrated into UniProtKB/TrEMBL.
DT 12-SEP-2018, sequence version 1.
DT 24-JAN-2024, entry version 31.
DE RecName: Full=Ferredoxin-type protein NapF {ECO:0000256|HAMAP-Rule:MF_02201};
GN Name=napF {ECO:0000256|HAMAP-Rule:MF_02201,
GN ECO:0000313|EMBL:ECI4935298.1};
GN ORFNames=AHX45_07345 {ECO:0000313|EMBL:EDH0570045.1}, DSQ81_05555
GN {ECO:0000313|EMBL:ECI4935298.1}, F4V61_07240
GN {ECO:0000313|EMBL:KAA8664215.1}, GBZ58_09230
GN {ECO:0000313|EMBL:HAB4460807.1}, NCTC7295_01778
GN {ECO:0000313|EMBL:SUG14163.1}, NCTC7303_02437
GN {ECO:0000313|EMBL:SUG30228.1}, NCTC7304_01794
GN {ECO:0000313|EMBL:SUG32364.1}, NCTC7307_01901
GN {ECO:0000313|EMBL:SQI22727.1}, NCTC8297_02057
GN {ECO:0000313|EMBL:SUG46819.1};
OS Salmonella enterica subsp. arizonae.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Salmonella.
OX NCBI_TaxID=59203 {ECO:0000313|EMBL:SQI22727.1, ECO:0000313|Proteomes:UP000248731};
RN [1] {ECO:0000313|EMBL:HAB4460807.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Salmonella enterica {ECO:0000313|EMBL:HAB4460807.1};
RX PubMed=30286803;
RA Souvorov A., Agarwala R., Lipman D.J.;
RT "SKESA: strategic k-mer extension for scrupulous assemblies.";
RL Genome Biol. 19:153-153(2018).
RN [2] {ECO:0000313|Proteomes:UP000248731, ECO:0000313|Proteomes:UP000254124}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NCTC7295 {ECO:0000313|EMBL:SUG14163.1,
RC ECO:0000313|Proteomes:UP000254124}, NCTC7303
RC {ECO:0000313|EMBL:SUG30228.1, ECO:0000313|Proteomes:UP000255443},
RC NCTC7304 {ECO:0000313|EMBL:SUG32364.1,
RC ECO:0000313|Proteomes:UP000254762}, NCTC7307
RC {ECO:0000313|EMBL:SQI22727.1, ECO:0000313|Proteomes:UP000248731}, and
RC NCTC8297 {ECO:0000313|EMBL:SUG46819.1,
RC ECO:0000313|Proteomes:UP000254741};
RG Pathogen Informatics;
RA Doyle S.;
RL Submitted (JUN-2018) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:ECI4935298.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=475813 {ECO:0000313|EMBL:ECI4935298.1};
RA Ashton P.M., Dallman T., Nair S., De Pinna E., Peters T., Grant K.;
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EMBL:EDH0570045.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=FDA00001204 {ECO:0000313|EMBL:EDH0570045.1};
RG GenomeTrakr network: Whole genome sequencing for foodborne pathogen traceback;
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
RN [5] {ECO:0000313|EMBL:KAA8664215.1, ECO:0000313|Proteomes:UP000322837}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCUG 6322T {ECO:0000313|EMBL:KAA8664215.1,
RC ECO:0000313|Proteomes:UP000322837};
RA Pineiro-Iglesias B., Tunovic T., Unosson C., Inganas E., Ohlen M.,
RA Cardew S., Jensie-Markopoulos S., Salva-Serra F., Jaen-Luchoro D.,
RA Karlsson R., Svensson-Stadler L., Chun J., Moore E.;
RT "Draft genome sequence of various Type strains from the CCUG.";
RL Submitted (SEP-2019) to the EMBL/GenBank/DDBJ databases.
RN [6] {ECO:0000313|EMBL:HAB4460807.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Salmonella enterica {ECO:0000313|EMBL:HAB4460807.1};
RG NCBI Pathogen Detection Project;
RL Submitted (OCT-2019) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Could be involved in the maturation of NapA, the catalytic
CC subunit of the periplasmic nitrate reductase, before its export into
CC the periplasm. {ECO:0000256|HAMAP-Rule:MF_02201}.
CC -!- COFACTOR:
CC Name=[4Fe-4S] cluster; Xref=ChEBI:CHEBI:49883;
CC Evidence={ECO:0000256|HAMAP-Rule:MF_02201};
CC -!- SUBUNIT: Interacts with the cytoplasmic NapA precursor.
CC {ECO:0000256|HAMAP-Rule:MF_02201}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|HAMAP-Rule:MF_02201}.
CC -!- SIMILARITY: Belongs to the NapF family. {ECO:0000256|HAMAP-
CC Rule:MF_02201}.
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DR EMBL; AAIVIG010000005; ECI4935298.1; -; Genomic_DNA.
DR EMBL; AAMGFJ010000005; EDH0570045.1; -; Genomic_DNA.
DR EMBL; DAAGTC010000004; HAB4460807.1; -; Genomic_DNA.
DR EMBL; VXJW01000003; KAA8664215.1; -; Genomic_DNA.
DR EMBL; LS483466; SQI22727.1; -; Genomic_DNA.
DR EMBL; UGWZ01000001; SUG14163.1; -; Genomic_DNA.
DR EMBL; UGXC01000002; SUG30228.1; -; Genomic_DNA.
DR EMBL; UGXD01000002; SUG32364.1; -; Genomic_DNA.
DR EMBL; UGXG01000002; SUG46819.1; -; Genomic_DNA.
DR RefSeq; WP_000228061.1; NZ_VXJW01000003.1.
DR AlphaFoldDB; A0A2X4T5B1; -.
DR Proteomes; UP000248731; Chromosome 1.
DR Proteomes; UP000254124; Unassembled WGS sequence.
DR Proteomes; UP000254741; Unassembled WGS sequence.
DR Proteomes; UP000254762; Unassembled WGS sequence.
DR Proteomes; UP000255443; Unassembled WGS sequence.
DR Proteomes; UP000322837; Unassembled WGS sequence.
DR Proteomes; UP000839688; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-UniRule.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd10564; NapF_like; 1.
DR Gene3D; 3.30.70.20; -; 2.
DR HAMAP; MF_02201; NapF; 1.
DR InterPro; IPR017896; 4Fe4S_Fe-S-bd.
DR InterPro; IPR017900; 4Fe4S_Fe_S_CS.
DR InterPro; IPR004496; NapF.
DR NCBIfam; TIGR00402; napF; 1.
DR PANTHER; PTHR43687; ADENYLYLSULFATE REDUCTASE, BETA SUBUNIT; 1.
DR PANTHER; PTHR43687:SF1; L-ASPARTATE SEMIALDEHYDE SULFURTRANSFERASE IRON-SULFUR SUBUNIT; 1.
DR Pfam; PF12838; Fer4_7; 1.
DR Pfam; PF13187; Fer4_9; 1.
DR SUPFAM; SSF54862; 4Fe-4S ferredoxins; 1.
DR PROSITE; PS00198; 4FE4S_FER_1; 1.
DR PROSITE; PS51379; 4FE4S_FER_2; 2.
PE 3: Inferred from homology;
KW 4Fe-4S {ECO:0000256|ARBA:ARBA00022485, ECO:0000256|HAMAP-Rule:MF_02201};
KW Cytoplasm {ECO:0000256|HAMAP-Rule:MF_02201};
KW Iron {ECO:0000256|ARBA:ARBA00023004, ECO:0000256|HAMAP-Rule:MF_02201};
KW Iron-sulfur {ECO:0000256|ARBA:ARBA00023014, ECO:0000256|HAMAP-
KW Rule:MF_02201};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|HAMAP-
KW Rule:MF_02201}; Reference proteome {ECO:0000313|Proteomes:UP000248731};
KW Repeat {ECO:0000256|ARBA:ARBA00022737, ECO:0000256|HAMAP-Rule:MF_02201}.
FT DOMAIN 27..56
FT /note="4Fe-4S ferredoxin-type"
FT /evidence="ECO:0000259|PROSITE:PS51379"
FT DOMAIN 131..160
FT /note="4Fe-4S ferredoxin-type"
FT /evidence="ECO:0000259|PROSITE:PS51379"
FT BINDING 36
FT /ligand="[4Fe-4S] cluster"
FT /ligand_id="ChEBI:CHEBI:49883"
FT /ligand_label="1"
FT /evidence="ECO:0000256|HAMAP-Rule:MF_02201"
FT BINDING 39
FT /ligand="[4Fe-4S] cluster"
FT /ligand_id="ChEBI:CHEBI:49883"
FT /ligand_label="1"
FT /evidence="ECO:0000256|HAMAP-Rule:MF_02201"
FT BINDING 42
FT /ligand="[4Fe-4S] cluster"
FT /ligand_id="ChEBI:CHEBI:49883"
FT /ligand_label="1"
FT /evidence="ECO:0000256|HAMAP-Rule:MF_02201"
FT BINDING 46
FT /ligand="[4Fe-4S] cluster"
FT /ligand_id="ChEBI:CHEBI:49883"
FT /ligand_label="1"
FT /evidence="ECO:0000256|HAMAP-Rule:MF_02201"
FT BINDING 68
FT /ligand="[4Fe-4S] cluster"
FT /ligand_id="ChEBI:CHEBI:49883"
FT /ligand_label="2"
FT /evidence="ECO:0000256|HAMAP-Rule:MF_02201"
FT BINDING 71
FT /ligand="[4Fe-4S] cluster"
FT /ligand_id="ChEBI:CHEBI:49883"
FT /ligand_label="2"
FT /evidence="ECO:0000256|HAMAP-Rule:MF_02201"
FT BINDING 74
FT /ligand="[4Fe-4S] cluster"
FT /ligand_id="ChEBI:CHEBI:49883"
FT /ligand_label="2"
FT /evidence="ECO:0000256|HAMAP-Rule:MF_02201"
FT BINDING 78
FT /ligand="[4Fe-4S] cluster"
FT /ligand_id="ChEBI:CHEBI:49883"
FT /ligand_label="2"
FT /evidence="ECO:0000256|HAMAP-Rule:MF_02201"
FT BINDING 140
FT /ligand="[4Fe-4S] cluster"
FT /ligand_id="ChEBI:CHEBI:49883"
FT /ligand_label="3"
FT /evidence="ECO:0000256|HAMAP-Rule:MF_02201"
FT BINDING 143
FT /ligand="[4Fe-4S] cluster"
FT /ligand_id="ChEBI:CHEBI:49883"
FT /ligand_label="3"
FT /evidence="ECO:0000256|HAMAP-Rule:MF_02201"
FT BINDING 146
FT /ligand="[4Fe-4S] cluster"
FT /ligand_id="ChEBI:CHEBI:49883"
FT /ligand_label="3"
FT /evidence="ECO:0000256|HAMAP-Rule:MF_02201"
FT BINDING 150
FT /ligand="[4Fe-4S] cluster"
FT /ligand_id="ChEBI:CHEBI:49883"
FT /ligand_label="3"
FT /evidence="ECO:0000256|HAMAP-Rule:MF_02201"
SQ SEQUENCE 163 AA; 17874 MW; 05FDC628CCF6A488 CRC64;
MVDLSRRSML TGSWRNASNG ILPPWAREAS YFLAQCLRCD ACIQACESNI LQRGTGGYPG
VDFKQGECSF CYACAQACSE SLFLPRHTRA WDLIFTLGEN CLARQSVECH RCQDSCEPMA
ITFRPTLSGI YQPQLDPQAC NGCGACVAIC PVSAIKAENN HAH
//
